miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40178_ath-MIR852:mirbase
          Length = 208

 Score =  214 bits (108), Expect = 1e-56
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagagctaaggcgcttatcttctttgatattgcatggagtatgcttctacttctctagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  tcagagctaaggcgcttatcttctttgatattgcatggagtatgcttctacttctctagg 110

                                                           
Query: 61  agatgcgttttatggaaatatcaaagaagataagcgccttagttctga 108
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 agatgcgttttatggaaatatcaaagaagataagcgccttagttctga 158



 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 77  aatatcaaagaagataagcgccttagttctga 108
           |||||||||||||||||||||||||| |||||
Sbjct: 82  aatatcaaagaagataagcgccttagctctga 51



 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 1   tcagagctaaggcgcttatcttctttgatatt 32
           ||||| ||||||||||||||||||||||||||
Sbjct: 158 tcagaactaaggcgcttatcttctttgatatt 127




>39932_aly-MIR852:mirbase
          Length = 76

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 70  ttatggaaatatcaaagaagataagcgccttagttctga 108
           ||||||| |||||||||||||||||||||||||||||||
Sbjct: 30  ttatggatatatcaaagaagataagcgccttagttctga 68



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 1  tcagagctaaggcgcttatcttctttgatat 31
          ||||| |||||||||||||||||||||||||
Sbjct: 68 tcagaactaaggcgcttatcttctttgatat 38