miRNEST 2.0, an integrative microRNA resource :: BLAST
>40165_ath-MIR841b:mirbase
Length = 495
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 1 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 259
Query: 61 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 199
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 198 ggctcgtattcacaagcaactt 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 185 tgtgaatacgagccactggaaactgaaagaaacaaagaaa 224
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 95 tttctttgtttctttcagtttccagtggctcgtattcaca 134
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 271 tttctttgtttatttcaatttctagtgggtcgtattcaca 310
>40164_ath-MIR841:mirbase
Length = 212
Score = 250 bits (126), Expect = 2e-67
Identities = 138/142 (97%)
Strand = Plus / Minus
Query: 1 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 118
Query: 61 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 120
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 117 tagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttcaagt 58
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 57 ggctcgtattcacaagcaactt 36
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 95 tttctttgtttctttcagtttccagtggctcgtattcacaagcaact 141
||||||||||| ||||| |||| ||||| ||||||||||| ||||||
Sbjct: 130 tttctttgtttatttcaatttctagtgggtcgtattcacatgcaact 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 44 tgtgaatacgagccacttgaaactgaaagaaacaaagaaa 83
>39923_aly-MIR841:mirbase
Length = 214
Score = 131 bits (66), Expect = 2e-31
Identities = 125/144 (86%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 1 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattt---t 57
|||||| |||||||||||||||| | ||| |||| |||||||||||||||||| | |
Sbjct: 180 gagttgcatgtgaatacgacccatcaaaaactgaagtaaacaaagaaatttcatgtctct 121
Query: 58 ttgtagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttcc 117
||||| |||||||| ||||||||| | ||||||| ||||||||||||| ||| |||||||
Sbjct: 120 ttgtactctaattttatgaaatttcacactgatactgtttctttgtttattttagtttcc 61
Query: 118 agtggctcgtattcacaagcaact 141
||||| ||||||||||| ||||||
Sbjct: 60 agtgggtcgtattcacaggcaact 37
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||||||||||||| |||| | |||||||||||||||
Sbjct: 44 tgtgaatacgacccactggaaactaaaataaacaaagaaa 83
