miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41755_bdi-MIR169c:mirbase
Length = 151
Score = 232 bits (117), Expect = 5e-62
Identities = 120/121 (99%)
Strand = Plus / Plus
Query: 1 gcagagaaggggatgcagccaaggatgacttgccgactcctggtgttgggggaattgcag 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 18 gcagagaaggggatgcagccaaggatgacttgccggctcctggtgttgggggaattgcag 77
Query: 61 ctttgttgagccttgagttagccggcaggttgtccttggctacacctagttctcttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ctttgttgagccttgagttagccggcaggttgtccttggctacacctagttctcttcttc 137
Query: 121 t 121
|
Sbjct: 138 t 138
>41966_osa-MIR169c:mirbase
Length = 112
Score = 101 bits (51), Expect = 1e-22
Identities = 94/105 (89%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 10 gggatgcagccaaggatgacttgccgactcctggtgttgggggaattgcagctttgttga 69
|||||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||
Sbjct: 5 gggatgcagccaaggatgacttgccggctcctggtattgggggaatctcagctttgctga 64
Query: 70 ---gcctt-gagttagccggcaggt-tgtccttggctacacctag 109
||||| ||||||||||||| || |||||||||||||||||||
Sbjct: 65 agcgccttggagttagccggcaagtctgtccttggctacacctag 109
>42745_zma-MIR169c:mirbase
Length = 134
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 3 agagaaggggatgcagccaaggatgacttgccgactcctgg 43
|||||| |||||||||||||||||||||||||| |||||||
Sbjct: 8 agagaacgggatgcagccaaggatgacttgccggctcctgg 48
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 tgtccttggctacacctagttctcttc 117
|||||||||||||||||||||||||||
Sbjct: 104 tgtccttggctacacctagttctcttc 130
>41603_vvi-MIR169g:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccgactc 39
||||||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgactc 36
>41357_ptc-MIR169c:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 gatgcagccaaggatgacttgccgac 37
||||||||||||||||||||||||||
Sbjct: 7 gatgcagccaaggatgacttgccgac 32
>41356_ptc-MIR169b:mirbase
Length = 113
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 gatgcagccaaggatgacttgccgac 37
||||||||||||||||||||||||||
Sbjct: 7 gatgcagccaaggatgacttgccgac 32
>41349_ptc-MIR169a:mirbase
Length = 165
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccgact 38
||||||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccgact 33
>41979_osa-MIR169p:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 ggatgcagccaaggatgacttgccg 35
|||||||||||||||||||||||||
Sbjct: 121 ggatgcagccaaggatgacttgccg 97
>41758_bdi-MIR169f:mirbase
Length = 151
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 ggatgcagccaaggatgacttgccg 35
|||||||||||||||||||||||||
Sbjct: 28 ggatgcagccaaggatgacttgccg 52
>41104_tcc-MIR169c:mirbase
Length = 142
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccgact 38
|||||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgact 43
>40679_mtr-MIR169b:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccgac 37
|||||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccgac 42
>40678_mtr-MIR169a:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccgac 37
|||||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccgac 42
>40451_gma-MIR169c:mirbase
Length = 115
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 gggatgcagccaaggatgacttgccgac 37
|||||| |||||||||||||||||||||
Sbjct: 5 gggatgaagccaaggatgacttgccgac 32
>40449_gma-MIR169a:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 gatgcagccaaggatgacttgccg 35
||||||||||||||||||||||||
Sbjct: 17 gatgcagccaaggatgacttgccg 40
>42744_zma-MIR169b:mirbase
Length = 156
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41
>42743_zma-MIR169a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41
>41965_osa-MIR169b:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccg 30
>41964_osa-MIR169a:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 36 tgcagccaaggatgacttgccga 58
>41602_vvi-MIR169f:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccga 33
>41599_vvi-MIR169c:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 10 atgcagccaaggatgacttgccg 32
>41597_vvi-MIR169a:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 10 atgcagccaaggatgacttgccg 32
>41536_sly-MIR169c:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccga 61
>41361_ptc-MIR169g:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccg 30
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ccggcaggttgtccttggcta 102
|||||||||||||||||||||
Sbjct: 78 ccggcaggttgtccttggcta 98
>41358_ptc-MIR169d:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccg 30
>41176_aqc-MIR169c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 2 atgcagccaaggatgacttgccg 24
>41106_tcc-MIR169e:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41
>41102_tcc-MIR169a:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 cggcaggttgtccttggctaca 104
||||||||||||||||||||||
Sbjct: 108 cggcaggttgtccttggctaca 129
>40684_mtr-MIR169g:mirbase
Length = 211
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 3 atgcagccaaggatgacttgccg 25
>40450_gma-MIR169b:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccga 31
>40273_bna-MIR169b:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 16 tgcagccaaggatgacttgccga 38
>40272_bna-MIR169a:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 17 tgcagccaaggatgacttgccga 39
>40046_ath-MIR169b:mirbase
Length = 181
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 40 atgcagccaaggatgacttgccg 62
>40045_ath-MIR169a:mirbase
Length = 226
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 16 tgcagccaaggatgacttgccga 38
>39835_aly-MIR169b:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atgcagccaaggatgacttgccg 35
|||||||||||||||||||||||
Sbjct: 43 atgcagccaaggatgacttgccg 65
>39834_aly-MIR169a:mirbase
Length = 263
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccga 36
|||||||||||||||||||||||
Sbjct: 25 tgcagccaaggatgacttgccga 47
>42539_sbi-MIR169k:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccgactcct 41
|||||||||||||||||||| |||||
Sbjct: 1 cagccaaggatgacttgccggctcct 26
>41619_vvi-MIR169w:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>41615_vvi-MIR169s:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>41607_vvi-MIR169k:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 ggcaggttgtccttggctac 103
||||||||||||||||||||
Sbjct: 90 ggcaggttgtccttggctac 109
>41606_vvi-MIR169j:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 ggcaggttgtccttggctac 103
||||||||||||||||||||
Sbjct: 90 ggcaggttgtccttggctac 109
>41534_sly-MIR169a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccg 60
>41360_ptc-MIR169f:mirbase
Length = 239
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41113_tcc-MIR169l:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>41112_tcc-MIR169k:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>41103_tcc-MIR169b:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>40687_mtr-MIR169j:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcagccaaggatgacttgccg 35
||||||||||||||||||||||
Sbjct: 4 tgcagccaaggatgacttgccg 25
>42760_zma-MIR169r:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 gcagccaaggatgacttgccg 35
|||||||||||||||||||||
Sbjct: 1 gcagccaaggatgacttgccg 21
>42529_sbi-MIR169a:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccga 36
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccga 21
>41359_ptc-MIR169e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 gcagccaaggatgacttgccg 35
|||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccg 30
>42530_sbi-MIR169b:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>41376_ptc-MIR169v:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 agccaaggatgacttgccgactcc 40
|||||||||||||||||| |||||
Sbjct: 11 agccaaggatgacttgcccactcc 34
>41373_ptc-MIR169s:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccg 31
>41362_ptc-MIR169h:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>40689_mtr-MIR169l:mirbase
Length = 240
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 gatgcagccaaggatgacttgccg 35
|||| |||||||||||||||||||
Sbjct: 2 gatgaagccaaggatgacttgccg 25
>40681_mtr-MIR169d:mirbase
Length = 240
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 gatgcagccaaggatgacttgccg 35
|||| |||||||||||||||||||
Sbjct: 2 gatgaagccaaggatgacttgccg 25
>40357_rco-MIR169b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccg 25
>40356_rco-MIR169a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccg 25
>40049_ath-MIR169e:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agccaaggatgacttgccga 36
||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccga 90
>40048_ath-MIR169d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agccaaggatgacttgccga 36
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62
>40047_ath-MIR169c:mirbase
Length = 411
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccg 132
>39838_aly-MIR169e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agccaaggatgacttgccga 36
||||||||||||||||||||
Sbjct: 53 agccaaggatgacttgccga 72
>39837_aly-MIR169d:mirbase
Length = 155
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agccaaggatgacttgccga 36
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62
>39836_aly-MIR169c:mirbase
Length = 292
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 cagccaaggatgacttgccg 35
||||||||||||||||||||
Sbjct: 45 cagccaaggatgacttgccg 64
