miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 238 bits (120), Expect = 8e-64
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 1 gaggtaggaggcggagcggaggaaaggcttcccgaccgggggaagctggtgattgagccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggtaggaggcggagcggaggaaaggcttcccgaccgggggaagctggtgattgagccg 60
Query: 61 cgccaatatctctcgcgcgccagtggaattgccggcttcagctgctttcgccgccgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgccaatatctctcgcgcgccagtggaattgccggcttcagctgctttcgccgccgcagc 120
>41981_osa-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatctct 73
||||||||||||||||||||||||
Sbjct: 67 tgattgagccgcgccaatatctct 90
>40322_bra-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatctc 72
|||||||||||||||||||||||
Sbjct: 84 tgattgagccgcgccaatatctc 106
>40291_bna-MIR171g:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatctc 72
|||||||||||||||||||||||
Sbjct: 58 tgattgagccgcgccaatatctc 80
>40290_bna-MIR171f:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatctc 72
|||||||||||||||||||||||
Sbjct: 84 tgattgagccgcgccaatatctc 106
>40060_ath-MIR171a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatctc 72
|||||||||||||||||||||||
Sbjct: 88 tgattgagccgcgccaatatctc 110
>39849_aly-MIR171a:mirbase
Length = 198
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatctc 72
|||||||||||||||||||||||
Sbjct: 130 tgattgagccgcgccaatatctc 152
>42774_zma-MIR171n:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatct 71
||||||||||||||||||||||
Sbjct: 57 tgattgagccgcgccaatatct 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatct 71
||||||||||||||||||||||
Sbjct: 79 tgattgagccgcgccaatatct 100
>42761_zma-MIR171a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 79 tgattgagccgcgccaatatc 99
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 83 tgattgagccgcgccaatatc 103
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 57 tgattgagccgcgccaatatc 77
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 70 tgattgagccgcgccaatatc 90
>41540_sly-MIR171c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 78 tgattgagccgcgccaatatc 98
>41231_csi-MIR171a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 67 tgattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 50 tgattgagccgcgccaatatc 70
|||||||||||||||||||||
Sbjct: 122 tgattgagccgcgccaatatc 142
>41989_osa-MIR171i:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatctctc 74
|||||||||||| |||||||||||
Sbjct: 89 gattgagccgcgtcaatatctctc 112
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 71 gattgagccgcgccaatatc 90
>41541_sly-MIR171d:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 72 gattgagccgcgccaatatc 91
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 76 gattgagccgcgccaatatc 95
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatc 103
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 81 gattgagccgcgccaatatc 100
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 69 gattgagccgcgccaatatc 88
>40365_rco-MIR171g:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 gattgagccgcgccaatatc 70
||||||||||||||||||||
Sbjct: 64 gattgagccgcgccaatatc 83
