miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41804_bdi-MIR437:mirbase
Length = 141
Score = 280 bits (141), Expect = 3e-76
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1 taaagacaatatgaatacatatatttcattatggataaaatgaaactaatttggtgtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaagacaatatgaatacatatatttcattatggataaaatgaaactaatttggtgtcat 60
Query: 61 aagtcttggtatatttgtctaaaagattggtcgaacttagagaagtttgacttaagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtcttggtatatttgtctaaaagattggtcgaacttagagaagtttgacttaagacaa 120
Query: 121 acataaatgttgtactccctc 141
|||||||||||||||||||||
Sbjct: 121 acataaatgttgtactccctc 141
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 71 atatttgtctaaaagattggtcgaacttagagaagtttgactta 114
|||||| ||||||| |||||| || ||||||||||||||||||
Sbjct: 128 atatttttctaaaaacttggtcaaagttagagaagtttgactta 171
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 66 ttggtatatttgtctaaaagattggtcgaacttagagaagtttgac 111
||||| ||||| |||| ||| |||||| || |||||||||||||||
Sbjct: 48 ttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 46.1 bits (23), Expect = 7e-06
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 39 aatgaaactaatttggtgtcataagtcttggtatatttgtctaaaagattggtcgaactt 98
||||||||||||||| ||||||| | |||| ||||| |||| || ||||| || ||
Sbjct: 90 aatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagtt 149
Query: 99 agagaagtttgactt 113
|||||||||||||||
Sbjct: 150 agagaagtttgactt 164
>42063_osa-MIR437:mirbase
Length = 213
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgacttaagacaaa 121
|||||| || |||||||||||||||||| ||||||
Sbjct: 149 ttggtcaaagttagagaagtttgacttaggacaaa 183
>41876_far-MIR437:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 88 tggtcgaacttagagaagtttgacttaagacaaa 121
||||| ||| ||||||||||||||||| ||||||
Sbjct: 36 tggtcaaacatagagaagtttgacttaggacaaa 69
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 160 ttggtcaaagttagagaagtttgactta 187
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 70 tatatttgtctaaaagattggtcgaacttagagaagtttgactt 113
||||||| ||||||| |||| | || |||||||||||||||||
Sbjct: 127 tatatttttctaaaaacttggccaaagttagagaagtttgactt 170
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 148 ttggtcaaagttagagaagtttgactta 175
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 146 ttggtcaaagttagagaagtttgactta 173
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 70 tatatttgtctaaaagattggtcgaacttagagaagtttgactt 113
||||||| ||| ||| |||||| || |||||||||||||||||
Sbjct: 58 tatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
