miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41809_bdi-MIR1122:mirbase
Length = 180
Score = 357 bits (180), Expect = 2e-99
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 tcgtccatgtatccatatttcattgccgaaatattacatgtgtatctagacgttttttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtccatgtatccatatttcattgccgaaatattacatgtgtatctagacgttttttac 60
Query: 61 acatagatacatccgtatttggacaaatttgagacgagtaatagagatcggatggagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatagatacatccgtatttggacaaatttgagacgagtaatagagatcggatggagtac 120
Query: 121 aattttttccccttcttatctggtcaccacatacacaaatttgcacagaactgaaccacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattttttccccttcttatctggtcaccacatacacaaatttgcacagaactgaaccacg 180
>41811_bdi-MIR1135:mirbase
Length = 138
Score = 91.7 bits (46), Expect = 2e-19
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 27 cgaaatattacatgtgtatctagacgttttttacacatagatacatccgtatttggacaa 86
||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||
Sbjct: 105 cgaaatattacatgt--atctagacacgttttacacatagatacatccgtatttgggcaa 48
Query: 87 atttgagacgagtaata 103
||||||||| |||||||
Sbjct: 47 atttgagacaagtaata 31
>41856_bdi-MIR5183:mirbase
Length = 152
Score = 50.1 bits (25), Expect = 6e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 41 tgtatctagacgttttttacacatagatacatccgtatttggacaaatttgag 93
|||||||| |||||||||| |||| ||| ||| ||||||||||||||||||
Sbjct: 63 tgtatctatacgttttttaagaatagctacgtccatatttggacaaatttgag 115
