miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41811_bdi-MIR1135:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 aggagcataattagtacttcctccgaccggtattacttgtctcaaatttgcccaaatacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcataattagtacttcctccgaccggtattacttgtctcaaatttgcccaaatacg 60
Query: 61 gatgtatctatgtgtaaaacgtgtctagatacatgtaatatttcgacaagtaattccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgtatctatgtgtaaaacgtgtctagatacatgtaatatttcgacaagtaattccgac 120
Query: 121 cggagggagtgccataat 138
||||||||||||||||||
Sbjct: 121 cggagggagtgccataat 138
>41809_bdi-MIR1122:mirbase
Length = 180
Score = 91.7 bits (46), Expect = 1e-19
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 31 tattacttgtctcaaatttgcccaaatacggatgtatctatgtgtaaaacgtgtctagat 90
||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 103 tattactcgtctcaaatttgtccaaatacggatgtatctatgtgtaaaaaacgtctagat 44
Query: 91 --acatgtaatatttcg 105
|||||||||||||||
Sbjct: 43 acacatgtaatatttcg 27
>42668_tae-MIR1135:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 83 gtctagatacatgtaatatttcgacaagtaattccgaccggagggagt 130
|||||||||||| || | | |||||||||||||||| ||||||||||
Sbjct: 60 gtctagatacatctatttctgcgacaagtaattccgaacggagggagt 107
>42660_tae-MIR1127:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 105 gacaagtaattccgaccggagggagt 130
||||||||||||||| ||||||||||
Sbjct: 108 gacaagtaattccgaacggagggagt 133
