miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41812_bdi-MIR1139:mirbase
          Length = 120

 Score =  238 bits (120), Expect = 8e-64
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctctgattggactattatttgttcgcactatcacgaggcttgaggctggtcacagtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcctctgattggactattatttgttcgcactatcacgaggcttgaggctggtcacagtgg 60

                                                                       
Query: 61  cgagtaacatacactagtaacatgcatatattaaagtagtaacatataagtctcatttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgagtaacatacactagtaacatgcatatattaaagtagtaacatataagtctcatttat 120




>42672_tae-MIR1139:mirbase
          Length = 216

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 53 cacagtggcgagtaacatacactagtaacat 83
          |||||||| ||||||||||||||||||||||
Sbjct: 3  cacagtggagagtaacatacactagtaacat 33