miRNEST 2.0, an integrative microRNA resource :: BLAST
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 gcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcggccggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcggccggtcc 82
Query: 61 ggttcggttcaccggcgctgcacacagtgacgcccttgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ggttcggttcaccggcgctgcacacagtgacgcccttgc 121
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 gcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcggccggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcggccggtcc 228
Query: 61 ggttcggttcaccggcgctgcacacagtgacgcccttgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggttcggttcaccggcgctgcacacagtgacgcccttgc 267
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 gcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcggccggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcggccggtcc 68
Query: 61 ggttcggttcaccggcgctgcacacagtgacgcccttgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ggttcggttcaccggcgctgcacacagtgacgcccttgc 107
>42037_osa-MIR397a:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 2 caaaggcatcattgagtgcagcgttgatgaaca 34
|||| ||||||||||||||||||||||||||||
Sbjct: 3 caaatgcatcattgagtgcagcgttgatgaaca 35
>42038_osa-MIR397b:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 aaggcatcattgagtgcagcgttgatgaac 33
||||||| ||||||||||||||||||||||
Sbjct: 5 aaggcattattgagtgcagcgttgatgaac 34
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatgaa 32
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatgaa 32
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>41244_csi-MIR397:mirbase
Length = 156
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatgaa 32
|||||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatgaa 40
>41143_tcc-MIR397:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatgaa 32
|||||||||||||||||||||||||
Sbjct: 19 catcattgagtgcagcgttgatgaa 43
>40380_rco-MIR397:mirbase
Length = 157
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatgaa 32
|||||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatgaa 28
>40298_bna-MIR397b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatg 30
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
>40297_bna-MIR397a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatg 30
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
>40087_ath-MIR397a:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatg 30
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>39880_aly-MIR397b:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatg 30
|||||||||||||||||||||||
Sbjct: 17 catcattgagtgcagcgttgatg 39
>39879_aly-MIR397a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttgatg 30
|||||||||||||||||||||||
Sbjct: 18 catcattgagtgcagcgttgatg 40
>42587_sbi-MIR397:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tcattgagtgcagcgttgatga 31
||||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatga 22
>41891_hvu-MIR397:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 65 cggttcaccggcgctgcacacagtgacgcc 94
||||||||||||||||||| || |||||||
Sbjct: 74 cggttcaccggcgctgcacgcaatgacgcc 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 ttgagtgcagcgttgatgaac 33
|||||||||||||||||||||
Sbjct: 14 ttgagtgcagcgttgatgaac 34
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 cattgagtgcagcgttgatgaa 32
||||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatgaa 33
>39382_pab-MIR397:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 catcattgagtgcagcgttga 28
|||||||||||||||||||||
Sbjct: 15 catcattgagtgcagcgttga 35
>41547_sly-MIR397:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 attgagtgcagcgttgatga 31
||||||||||||||||||||
Sbjct: 20 attgagtgcagcgttgatga 39