miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40301_bna-MIR1140:mirbase
Length = 150
Score = 256 bits (129), Expect = 4e-69
Identities = 143/150 (95%)
Strand = Plus / Plus
Query: 1 ctcaatcttttatatggctccgattggctttaggctgttgtggctttgacttctttctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcaatcttttatatggctccgattggctttaggctgttgtggctttgacttctttctaa 60
Query: 61 agtcttcaaaatttagtttttcacaatcacgttaaannnnnnnaaaagtcacagccacaa 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 agtcttcaaaatttagtttttcacaatcacgttaaatttttttaaaagtcacagccacaa 120
Query: 121 cagcctaaaccaatcggagccatggtgatg 150
||||||||||||||||||||||||||||||
Sbjct: 121 cagcctaaaccaatcggagccatggtgatg 150
Score = 54.0 bits (27), Expect = 3e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 106 aagtcacagccacaacagcctaaa-ccaatcggagccat 143
|||||| ||||||||||||||||| ||||||||||||||
Sbjct: 52 aagtcaaagccacaacagcctaaagccaatcggagccat 14
Score = 54.0 bits (27), Expect = 3e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 14 atggctccgattggctttaggctgttgtggctttgactt 52
|||||||||||||| ||||||||||||||||| ||||||
Sbjct: 143 atggctccgattgg-tttaggctgttgtggctgtgactt 106
