miRNEST 2.0, an integrative microRNA resource :: BLAST
>40303_bna-MIR2111b:mirbase
Length = 119
Score = 236 bits (119), Expect = 3e-63
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 gcacttgatgaggaactggtaatctgcatcctgaggtttaaaaatacataggcacatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgatgaggaactggtaatctgcatcctgaggtttaaaaatacataggcacatgca 60
Query: 61 aatgtgtgtattatagtttttaatcctcgggatacagattacctcttccttttactgaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgtgtgtattatagtttttaatcctcgggatacagattacctcttccttttactgaa 119
>40328_bra-MIR2111b:mirbase
Length = 113
Score = 97.6 bits (49), Expect = 2e-21
Identities = 92/106 (86%), Gaps = 9/106 (8%)
Strand = Plus / Plus
Query: 13 gaactggtaatctgcatcctgaggtttaaaaatacataggca-------catgcaaatgt 65
||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 7 gaactggtaatctgcatcctgaggtttaaaaatttataggcaattaaaacatgcaaatgt 66
Query: 66 gtgtattatagtttttaatcctcgggatacagattacctcttcctt 111
|||||| | ||||||||||||||||||| |||||||||||||||
Sbjct: 67 gtgtatggt--tttttaatcctcgggatacggattacctcttcctt 110
>40215_ath-MIR2111b:mirbase
Length = 167
Score = 81.8 bits (41), Expect = 1e-16
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 3 acttgatgaggaactggtaatctgcatcctgaggtttaaaaatacataggcacatgcaaa 62
||||||||| |||| |||||||||||||||||||||||||| | || ||| || || |
Sbjct: 28 acttgatgatgaacgggtaatctgcatcctgaggtttaaaaccaattaagcatatacata 87
Query: 63 tgtgtgtattatagtttttaatcctcgggatacagattacctcttcctt 111
|| | | | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 88 tgcgaatgt-atagtttttaatcctcgggatacagtttacctcttcctt 135
>39947_aly-MIR2111b:mirbase
Length = 123
Score = 71.9 bits (36), Expect = 1e-13
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Plus
Query: 3 acttgatgaggaactggtaatctgcatcctgaggtttaaaaatacataggcacatgcaaa 62
||||| ||| |||| |||||||||||||||||||||||||| | ||| ||| | | |
Sbjct: 3 acttggtgatgaacgggtaatctgcatcctgaggtttaaaactttataagcatttacgta 62
Query: 63 tgtgtgtattatagtttt--taatcctcgggatacagattacctcttcctt 111
|||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 63 tgtgactat-atagtttttttaatcctcgggatacagattacctcttcctt 112
>40776_mtr-MIR2111s:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 ggtaatctgcatcctgaggtttaaaa 43
||||||||||||||||||||||||||
Sbjct: 19 ggtaatctgcatcctgaggtttaaaa 44
>40647_lja-MIR2111:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 ggtaatctgcatcctgaggtttaaaa 43
||||||||||||||||||||||||||
Sbjct: 40 ggtaatctgcatcctgaggtttaaaa 65
>40327_bra-MIR2111a:mirbase
Length = 161
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 9 tgaggaactggtaatctgcatcctgaggtttaaa 42
|||||| | |||||||||||||||||||||||||
Sbjct: 18 tgaggaccgggtaatctgcatcctgaggtttaaa 51
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 atagtttttaatcctcgggatacagattacctcttcctt 111
|||| ||||| |||||||||| | |||||||||||||||
Sbjct: 101 atagcttttagtcctcgggatgcggattacctcttcctt 139
>40302_bna-MIR2111a:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 9 tgaggaactggtaatctgcatcctgaggtttaaa 42
|||||| | |||||||||||||||||||||||||
Sbjct: 16 tgaggaccgggtaatctgcatcctgaggtttaaa 49
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 atagtttttaatcctcgggatacagattacctcttcctt 111
|||| ||||| |||||||||| | |||||||||||||||
Sbjct: 99 atagcttttagtcctcgggatgcggattacctcttcctt 137
>40214_ath-MIR2111a:mirbase
Length = 159
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 9 tgaggaactggtaatctgcatcctgaggtttaaa 42
|||||| | |||||||||||||||||||||||||
Sbjct: 17 tgaggaccgggtaatctgcatcctgaggtttaaa 50
>39946_aly-MIR2111a:mirbase
Length = 141
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 9 tgaggaactggtaatctgcatcctgaggtttaaa 42
|||||| | |||||||||||||||||||||||||
Sbjct: 8 tgaggatcgggtaatctgcatcctgaggtttaaa 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 72 tatagtttttaatcctcgggatacagattacctcttcctt 111
||||| ||||| |||||||||| | |||||||||||||||
Sbjct: 91 tatagcttttagtcctcgggatgcggattacctcttcctt 130
>40775_mtr-MIR2111r:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggtttaaaa 43
||||||||||||||||||||||||
Sbjct: 21 taatctgcatcctgaggtttaaaa 44
>40774_mtr-MIR2111q:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggtttaaaa 43
||||||||||||||||||||||||
Sbjct: 98 taatctgcatcctgaggtttaaaa 121
>41161_tcc-MIR2111:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 ggtaatctgcatcctgaggttta 40
|||||||||||||||||||||||
Sbjct: 19 ggtaatctgcatcctgaggttta 41
>40773_mtr-MIR2111p:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 ggtaatctgcatcctgaggttta 40
|||||||||||||||||||||||
Sbjct: 19 ggtaatctgcatcctgaggttta 41
>40769_mtr-MIR2111l:mirbase
Length = 199
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggtttaaa 42
|||||||||||||||||||||||
Sbjct: 160 taatctgcatcctgaggtttaaa 182
>40770_mtr-MIR2111m:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggtttaa 41
||||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggtttaa 41
>40772_mtr-MIR2111o:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40771_mtr-MIR2111n:mirbase
Length = 393
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 354 taatctgcatcctgaggttta 374
>40768_mtr-MIR2111k:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40767_mtr-MIR2111j:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40766_mtr-MIR2111i:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 140 taatctgcatcctgaggttta 160
>40765_mtr-MIR2111h:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40763_mtr-MIR2111f:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40762_mtr-MIR2111e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40761_mtr-MIR2111d:mirbase
Length = 152
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 113 taatctgcatcctgaggttta 133
>40760_mtr-MIR2111c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 20 taatctgcatcctgaggttta 40
>40759_mtr-MIR2111b:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 140 taatctgcatcctgaggttta 160
>40758_mtr-MIR2111a:mirbase
Length = 310
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 taatctgcatcctgaggttta 40
|||||||||||||||||||||
Sbjct: 289 taatctgcatcctgaggttta 309
>41698_vvi-MIR2111:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 18 ggtaatctgcatcctgaggt 37
||||||||||||||||||||
Sbjct: 21 ggtaatctgcatcctgaggt 40
