miRNEST 2.0, an integrative microRNA resource :: BLAST
>40308_bol-MIR398a:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 tctcaaaggagtgtcatgagaacacggatcctcttgtttctttaagatttccactgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctcaaaggagtgtcatgagaacacggatcctcttgtttctttaagatttccactgaaac 60
Query: 61 cattgagtattgtgttctcaggtcacccctttgaa 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 cattgagtattgtgttctcaggtcacccctttgaa 95
>39881_aly-MIR398a:mirbase
Length = 182
Score = 109 bits (55), Expect = 4e-25
Identities = 87/95 (91%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 tctcaaaggagtgtcatgagaacacggatcctcttgtttctttaagatttccactgaaac 60
||||||||||||||||||||||||| |||||| | |||||||| | |||| || ||||||
Sbjct: 54 tctcaaaggagtgtcatgagaacacagatcctatggtttcttt-acattttcattgaaac 112
Query: 61 cattgagtattgtgttctcaggtcacccctttgaa 95
|||||||| ||||||||||||||||||||||||||
Sbjct: 113 cattgagt-ttgtgttctcaggtcacccctttgaa 146
>40089_ath-MIR398a:mirbase
Length = 105
Score = 97.6 bits (49), Expect = 1e-21
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 3 tcaaaggagtgtcatgagaacacggatcctcttgtttctttaagatttccactgaaacca 62
||||||||||| |||| |||||| ||||| | ||||||| || ||||||| ||||||||
Sbjct: 8 tcaaaggagtggcatgtgaacacatatcctatggtttcttcaa-atttccattgaaacca 66
Query: 63 ttgagtattgtgttctcaggtcacccctttgaa 95
|||||| ||||||||||||||||||||||||||
Sbjct: 67 ttgagttttgtgttctcaggtcacccctttgaa 99
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 attgtgttctcaggtcacccctttg 93
|||||||||||||||||||||||||
Sbjct: 99 attgtgttctcaggtcacccctttg 123
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttga 94
|||||||||||||||||||||||||
Sbjct: 72 ttgtgttctcaggtcacccctttga 96
>40479_gma-MIR398b:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttga 94
|||||||||||||||||||||||||
Sbjct: 95 ttgtgttctcaggtcacccctttga 119
>40478_gma-MIR398a:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttga 94
|||||||||||||||||||||||||
Sbjct: 76 ttgtgttctcaggtcacccctttga 100
>40403_ahy-MIR398:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttga 94
|||||||||||||||||||||||||
Sbjct: 128 ttgtgttctcaggtcacccctttga 152
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttg 93
||||||||||||||||||||||||
Sbjct: 72 ttgtgttctcaggtcacccctttg 95
>41245_csi-MIR398:mirbase
Length = 225
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttg 93
||||||||||||||||||||||||
Sbjct: 131 ttgtgttctcaggtcacccctttg 154
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttg 93
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>41078_gra-MIR398:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttg 93
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>41059_ghr-MIR398:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctttg 93
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>42039_osa-MIR398a:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgtgttctcaggtcacccctttg 93
|||||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccctttg 107
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgtgttctcaggtcacccctttg 93
|||||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccctttg 102
>40381_rco-MIR398a:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgtgttctcaggtcacccctttg 93
|||||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccctttg 88
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 ttgtgttctcaggtcacccctt 91
||||||||||||||||||||||
Sbjct: 124 ttgtgttctcaggtcacccctt 145
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 tgtgttctcaggtcacccct 90
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 tgtgttctcaggtcacccct 90
||||||||||||||||||||
Sbjct: 86 tgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 tgtgttctcaggtcacccct 90
||||||||||||||||||||
Sbjct: 91 tgtgttctcaggtcacccct 110
