miRNEST 2.0, an integrative microRNA resource :: BLAST
>40323_bra-MIR172a:mirbase
Length = 119
Score = 236 bits (119), Expect = 3e-63
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 cgttttttgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgttttttgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt 60
Query: 61 ttaattagggttttgatatgtatatgagaatcttgatgatgctgcatcaacaaccgacg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaattagggttttgatatgtatatgagaatcttgatgatgctgcatcaacaaccgacg 119
>40306_bol-MIR172a:mirbase
Length = 119
Score = 236 bits (119), Expect = 3e-63
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 cgttttttgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgttttttgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt 60
Query: 61 ttaattagggttttgatatgtatatgagaatcttgatgatgctgcatcaacaaccgacg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaattagggttttgatatgtatatgagaatcttgatgatgctgcatcaacaaccgacg 119
>39853_aly-MIR172b:mirbase
Length = 146
Score = 151 bits (76), Expect = 1e-37
Identities = 108/119 (90%), Gaps = 6/119 (5%)
Strand = Plus / Plus
Query: 1 cgttttttgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt 60
|||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 13 cgttgtttgtaggtgcagcaccatcaagattcacatgaaaattgataaatctcctaa--- 69
Query: 61 ttaattagggttttgatatgtatatgagaatcttgatgatgctgcatcaacaaccgacg 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 70 ---attagggttttgatatgtatatgagaatcttgatgatgctgcatcaacaatcgacg 125
>40324_bra-MIR172b:mirbase
Length = 107
Score = 131 bits (66), Expect = 1e-31
Identities = 99/108 (91%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 8 tgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt---ttaa 64
|||||| |||||||||| |||||||||||||||||||| ||| | |||||||| ||||
Sbjct: 1 tgtaggtgcagcaccattaagattcacatggaaattgagaaaac-cctaatttatattaa 59
Query: 65 ttagggttttgatatgtatatgagaatcttgatgatgctgcatcaaca 112
|||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttagggttctgatatgtatatgagaatcttgatgatgctgcatcaaca 107
>40307_bol-MIR172b:mirbase
Length = 107
Score = 131 bits (66), Expect = 1e-31
Identities = 99/108 (91%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 8 tgtaggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaattt---ttaa 64
|||||| |||||||||| |||||||||||||||||||| ||| | |||||||| ||||
Sbjct: 1 tgtaggtgcagcaccattaagattcacatggaaattgagaaaac-cctaatttatattaa 59
Query: 65 ttagggttttgatatgtatatgagaatcttgatgatgctgcatcaaca 112
|||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttagggttctgatatgtatatgagaatcttgatgatgctgcatcaaca 107
>40064_ath-MIR172b:mirbase
Length = 95
Score = 123 bits (62), Expect = 3e-29
Identities = 91/101 (90%), Gaps = 6/101 (5%)
Strand = Plus / Plus
Query: 11 aggcgcagcaccatcaagattcacatggaaattgaaaaatctcctaatttttaattaggg 70
|||||||||||||| |||||||||||||||||||| |||| ||||| |||||||
Sbjct: 1 aggcgcagcaccattaagattcacatggaaattgataaataccctaa------attaggg 54
Query: 71 ttttgatatgtatatgagaatcttgatgatgctgcatcaac 111
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ttttgatatgtatatgagaatcttgatgatgctgcatcaac 95
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 82 atatgagaatcttgatgatgctgcatca 109
||||||||||||||||||||||||||||
Sbjct: 93 atatgagaatcttgatgatgctgcatca 120
>41993_osa-MIR172d:mirbase
Length = 130
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcatca 109
||||||||||||||||||||||||||
Sbjct: 88 atgagaatcttgatgatgctgcatca 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 gcagcaccatcaagattcacat 36
||||||||||||||||||||||
Sbjct: 22 gcagcaccatcaagattcacat 43
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcatc 108
|||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatc 120
>41725_ata-MIR172:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcatc 108
|||||||||||||||||||||||||
Sbjct: 206 atgagaatcttgatgatgctgcatc 230
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 84 atgagaatcttgatgatgctgcatc 108
|||||||||||||||||||||||||
Sbjct: 32 atgagaatcttgatgatgctgcatc 8
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatca 109
|||||||||||||||||||||||||
Sbjct: 97 tgagaatcttgatgatgctgcatca 121
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatca 109
|||||||||||||||||||||||||
Sbjct: 98 tgagaatcttgatgatgctgcatca 122
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcatc 108
|||||||||||||||||||||||||
Sbjct: 117 atgagaatcttgatgatgctgcatc 141
>40463_gma-MIR172f:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatca 109
|||||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcatca 131
>40459_gma-MIR172b:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatca 109
|||||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcatca 136
>40458_gma-MIR172a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatca 109
|||||||||||||||||||||||||
Sbjct: 118 tgagaatcttgatgatgctgcatca 142
>40063_ath-MIR172a:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcatc 108
|||||||||||||||||||||||||
Sbjct: 75 atgagaatcttgatgatgctgcatc 99
>39852_aly-MIR172a:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcatc 108
|||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatc 120
>42778_zma-MIR172d:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 51 atgagaatcttgatgatgctgcat 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 gcagcaccatcaagattcacat 36
||||||||||||||||||||||
Sbjct: 3 gcagcaccatcaagattcacat 24
>42777_zma-MIR172c:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgcat 123
>42776_zma-MIR172b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgcat 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 gcagcaccatcaagattcacat 36
||||||||||||||||||||||
Sbjct: 3 gcagcaccatcaagattcacat 24
>42775_zma-MIR172a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 60 atgagaatcttgatgatgctgcat 83
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 65 atgagaatcttgatgatgctgcat 88
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 gcagcaccatcaagattcacatgg 38
||||||||||||||||||||||||
Sbjct: 3 gcagcaccatcaagattcacatgg 26
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcat 119
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcat 102
>41990_osa-MIR172a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatc 108
||||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgcatc 100
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 atgagaatcttgatgatgctgcat 107
||||||||||||||||||||||||
Sbjct: 76 atgagaatcttgatgatgctgcat 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gaatcttgatgatgctgcatca 109
||||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatca 7
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 85 tgagaatcttgatgatgctgcatc 108
||||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgcatc 8
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatc 108
||||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgcatc 153
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatc 108
||||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgcatc 132
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcatc 108
||||||||||||||||||||||||
Sbjct: 147 tgagaatcttgatgatgctgcatc 170
>40065_ath-MIR172c:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 tatgagaatcttgatgatgctgca 106
||||||||||||||||||||||||
Sbjct: 94 tatgagaatcttgatgatgctgca 117
>39854_aly-MIR172c:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 tatgagaatcttgatgatgctgca 106
||||||||||||||||||||||||
Sbjct: 94 tatgagaatcttgatgatgctgca 117
>41543_sly-MIR172b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgcat 107
|||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135
>41542_sly-MIR172a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 gagaatcttgatgatgctgcat 107
||||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgcat 106
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 tatgagaatcttgatgatgctgcatc 108
|||| |||||||||||||||||||||
Sbjct: 149 tatgggaatcttgatgatgctgcatc 174
>41233_csi-MIR172a:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgca 106
||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgca 134
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatca 109
||||||||||||||||||||||
Sbjct: 124 gaatcttgatgatgctgcatca 145
>40067_ath-MIR172e:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatca 109
||||||||||||||||||||||
Sbjct: 96 gaatcttgatgatgctgcatca 117
>40066_ath-MIR172d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgca 106
||||||||||||||||||||||
Sbjct: 86 tgagaatcttgatgatgctgca 107
>39856_aly-MIR172e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatca 109
||||||||||||||||||||||
Sbjct: 99 gaatcttgatgatgctgcatca 120
>39855_aly-MIR172d:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 tgagaatcttgatgatgctgca 106
||||||||||||||||||||||
Sbjct: 110 tgagaatcttgatgatgctgca 131
>41991_osa-MIR172b:mirbase
Length = 238
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatc 108
|||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcatc 229
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatc 108
|||||||||||||||||||||
Sbjct: 205 gaatcttgatgatgctgcatc 225
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatc 108
|||||||||||||||||||||
Sbjct: 105 gaatcttgatgatgctgcatc 125
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcatc 108
|||||||||||||||||||||
Sbjct: 87 gaatcttgatgatgctgcatc 107
>40702_mtr-MIR172:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 atatgagaatcttgatgatgctgca 106
||||||||||| |||||||||||||
Sbjct: 83 atatgagaatcctgatgatgctgca 107
>40461_gma-MIR172d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 atatgagaatcttgatgatgctgca 106
||||| |||||||||||||||||||
Sbjct: 106 atatgggaatcttgatgatgctgca 130
>40366_rco-MIR172:mirbase
Length = 144
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 atatgagaatcttgatgatgctgca 106
||||| |||||||||||||||||||
Sbjct: 114 atatgggaatcttgatgatgctgca 138
>42779_zma-MIR172e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcat 107
||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gaatcttgatgatgctgcat 107
||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 tatgagaatcttgatgatgctgca 106
|||| |||||||||||||||||||
Sbjct: 111 tatgggaatcttgatgatgctgca 134
>40462_gma-MIR172e:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 tatgagaatcttgatgatgctgca 106
|||| |||||||||||||||||||
Sbjct: 110 tatgggaatcttgatgatgctgca 133
>40460_gma-MIR172c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 tatgagaatcttgatgatgctgca 106
|||| |||||||||||||||||||
Sbjct: 110 tatgggaatcttgatgatgctgca 133
