miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39311_cre-MIR910:mirbase
Length = 227
Score = 450 bits (227), Expect = e-127
Identities = 227/227 (100%)
Strand = Plus / Plus
Query: 1 ccgctgcagccggtcaggtgcacccggaggtgccggagcggttggggttgcggggcccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgctgcagccggtcaggtgcacccggaggtgccggagcggttggggttgcggggcccgc 60
Query: 61 aggtagctgccgttgagcccgacgctgctgccgccgcgccggtgctgctgcgcggcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtagctgccgttgagcccgacgctgctgccgccgcgccggtgctgctgcgcggcagca 120
Query: 121 cctgaccggctgcagcagcgtcgggctcgaccgcagccacctgcgggtcccgcagcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctgaccggctgcagcagcgtcgggctcgaccgcagccacctgcgggtcccgcagcccca 180
Query: 181 gcagctaccgactgcacctgaccggctgcacctgaccggctgcaggg 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcagctaccgactgcacctgaccggctgcacctgaccggctgcaggg 227
Score = 115 bits (58), Expect = 2e-26
Identities = 118/138 (85%)
Strand = Plus / Minus
Query: 43 tggggttgcggggcccgcaggtagctgccgttgagcccgacgctgctgccgccgcgccgg 102
||||| |||||| ||||||||| ||||| || ||||||||||||||||| |||| | ||
Sbjct: 180 tggggctgcgggacccgcaggtggctgcggtcgagcccgacgctgctgcagccggtcagg 121
Query: 103 tgctgctgcgcggcagcacctgaccggctgcagcagcgtcgggctcgaccgcagccacct 162
|||||| |||| |||||||| | |||| ||||||||||||||||| || ||||| ||||
Sbjct: 120 tgctgccgcgcagcagcaccggcgcggcggcagcagcgtcgggctcaacggcagctacct 61
Query: 163 gcgggtcccgcagcccca 180
||||| |||||| |||||
Sbjct: 60 gcgggccccgcaacccca 43
