miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39316_cre-MIR915:mirbase
Length = 286
Score = 567 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 1 caacgctgccgcggaggcgctcggcgtggacggggacgagctcggcgaccttctctttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacgctgccgcggaggcgctcggcgtggacggggacgagctcggcgaccttctctttac 60
Query: 61 gctgtcgaaactatcggaggagcagctcaaattctttccaatagccgctggcaataaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgtcgaaactatcggaggagcagctcaaattctttccaatagccgctggcaataaggc 120
Query: 121 aatcgttgcgtttgggtcctctcgcagactgcgcaacgcaacgattgccttattgtcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcgttgcgtttgggtcctctcgcagactgcgcaacgcaacgattgccttattgtcagc 180
Query: 181 gcctatcggaaagaattcgagctgcccctccgatagttccgacagcgtaaaaagaaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcctatcggaaagaattcgagctgcccctccgatagttccgacagcgtaaaaagaaggtc 240
Query: 241 gccgagctcggtgcccgtccacgccgagccctccgcggcagcgttg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccgagctcggtgcccgtccacgccgagccctccgcggcagcgttg 286
Score = 264 bits (133), Expect = 3e-71
Identities = 256/289 (88%), Gaps = 6/289 (2%)
Strand = Plus / Minus
Query: 1 caacgctgccgcggaggcgctcggcgtggacggggac-gagctcggcgaccttctcttta 59
||||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 286 caacgctgccgcggagg-gctcggcgtggacgggcaccgagctcggcgaccttcttttta 228
Query: 60 cgctgtcgaaactatcggaggagcagctcaaattctttccaatagccgctggcaataagg 119
|||||||| |||||||||||| ||||||| |||||||||| |||| ||||| ||||||||
Sbjct: 227 cgctgtcggaactatcggaggggcagctcgaattctttccgataggcgctgacaataagg 168
Query: 120 caatcgttgcgtttgggtcctctcgcagactgcgcaa-cgcaacgattgccttattgtca 178
||||||||||||| | | ||| ||| | ||| ||||||||||||||||||| ||
Sbjct: 167 caatcgttgcgtt-gcgcagtctgcgagaggacccaaacgcaacgattgccttattgcca 109
Query: 179 gcgcctatcggaaagaattcgagctgcccctccgatagttccgacagcgtaaaaagaagg 238
||| |||| |||||||||| ||||||| |||||||||||| |||||||||||| ||||||
Sbjct: 108 gcggctattggaaagaatttgagctgctcctccgatagtttcgacagcgtaaagagaagg 49
Query: 239 tcgccgagctcggtgcccgtccacgccgagc-cctccgcggcagcgttg 286
||||||||||| || |||||||||||||||| |||||||||||||||||
Sbjct: 48 tcgccgagctc-gtccccgtccacgccgagcgcctccgcggcagcgttg 1
