miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39319_cre-MIR918:mirbase
Length = 269
Score = 533 bits (269), Expect = e-152
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 1 ccaatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagct 60
Query: 61 gctggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccg 120
Query: 121 ctcatgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcatgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaa 180
Query: 181 acgaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgag 240
Query: 241 acatgtgcggcgcagacgtcccgcattgg 269
|||||||||||||||||||||||||||||
Sbjct: 241 acatgtgcggcgcagacgtcccgcattgg 269
Score = 192 bits (97), Expect = 1e-49
Identities = 226/269 (84%)
Strand = Plus / Minus
Query: 1 ccaatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagct 60
||||| || ||||||||| ||||||||||||||||| || |||| | || |||||||||
Sbjct: 269 ccaatgcgggacgtctgcgccgcacatgtctcaggaggacatcgccactattagcaagct 210
Query: 61 gctggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccg 120
|| ||||||||||||||||||| ||| ||||||||| |||| || | ||||| |||||
Sbjct: 209 acttcagggtatctcggtcagcatttcgtttggcaagatgtccgcttcaggtacacgccg 150
Query: 121 ctcatgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaa 180
|||| ||||||| | | ||||||| ||||||||| ||||| | || |||| |||||||||
Sbjct: 149 ctcacgcgatgaaggcgtcatcgcatgagcggcgcgtacccggagtggacgtcttgccaa 90
Query: 181 acgaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgag 240
||| ||||||||||||||||||| || ||||||||| || | |||| || |||||||
Sbjct: 89 tcgagatgctgaccgagataccctccagcagcttgctactacggacgatctcttcctgag 30
Query: 241 acatgtgcggcgcagacgtcccgcattgg 269
|||||||||| ||||||||| || |||||
Sbjct: 29 acatgtgcggtgcagacgtctcgtattgg 1
>39321_cre-MIR919:mirbase
Length = 265
Score = 525 bits (265), Expect = e-150
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 3 aatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgc 206
Query: 63 tggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgct 146
Query: 123 catgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 catgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaac 86
Query: 183 gaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagac 26
Query: 243 atgtgcggcgcagacgtcccgcatt 267
|||||||||||||||||||||||||
Sbjct: 25 atgtgcggcgcagacgtcccgcatt 1
Score = 188 bits (95), Expect = 2e-48
Identities = 212/251 (84%)
Strand = Plus / Plus
Query: 10 gacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgctggaggg 69
||||||||| ||||||||||||||||| || |||| | || ||||||||| || ||||
Sbjct: 8 gacgtctgcgccgcacatgtctcaggaggacatcgccactattagcaagctacttcaggg 67
Query: 70 tatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgctcatgcga 129
||||||||||||||| ||| ||||||||| |||| || | ||||| ||||||||| ||||
Sbjct: 68 tatctcggtcagcatttcgtttggcaagatgtccgcttcaggtacacgccgctcacgcga 127
Query: 130 tgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaacgaaatgc 189
||| | | ||||||| ||||||||| ||||| | || |||| ||||||||| ||| ||||
Sbjct: 128 tgaaggcgtcatcgcatgagcggcgcgtacccggagtggacgtcttgccaatcgagatgc 187
Query: 190 tgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagacatgtgcg 249
||||||||||||||| || ||||||||| || | |||| || ||||||||||||||||
Sbjct: 188 tgaccgagataccctccagcagcttgctactacggacgatctcttcctgagacatgtgcg 247
Query: 250 gcgcagacgtc 260
| |||||||||
Sbjct: 248 gtgcagacgtc 258
>39320_cre-MIR919:mirbase
Length = 265
Score = 525 bits (265), Expect = e-150
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 3 aatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatacgagacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgc 206
Query: 63 tggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tggagggtatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgct 146
Query: 123 catgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 catgcgatgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaac 86
Query: 183 gaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gaaatgctgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagac 26
Query: 243 atgtgcggcgcagacgtcccgcatt 267
|||||||||||||||||||||||||
Sbjct: 25 atgtgcggcgcagacgtcccgcatt 1
Score = 188 bits (95), Expect = 2e-48
Identities = 212/251 (84%)
Strand = Plus / Plus
Query: 10 gacgtctgcaccgcacatgtctcaggaagagatcgtccgtagtagcaagctgctggaggg 69
||||||||| ||||||||||||||||| || |||| | || ||||||||| || ||||
Sbjct: 8 gacgtctgcgccgcacatgtctcaggaggacatcgccactattagcaagctacttcaggg 67
Query: 70 tatctcggtcagcatctcgattggcaagacgtccactccgggtacgcgccgctcatgcga 129
||||||||||||||| ||| ||||||||| |||| || | ||||| ||||||||| ||||
Sbjct: 68 tatctcggtcagcatttcgtttggcaagatgtccgcttcaggtacacgccgctcacgcga 127
Query: 130 tgacgccttcatcgcgtgagcggcgtgtacctgaagcggacatcttgccaaacgaaatgc 189
||| | | ||||||| ||||||||| ||||| | || |||| ||||||||| ||| ||||
Sbjct: 128 tgaaggcgtcatcgcatgagcggcgcgtacccggagtggacgtcttgccaatcgagatgc 187
Query: 190 tgaccgagataccctgaagtagcttgctaatagtggcgatgtcctcctgagacatgtgcg 249
||||||||||||||| || ||||||||| || | |||| || ||||||||||||||||
Sbjct: 188 tgaccgagataccctccagcagcttgctactacggacgatctcttcctgagacatgtgcg 247
Query: 250 gcgcagacgtc 260
| |||||||||
Sbjct: 248 gtgcagacgtc 258
