miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaac 42
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 174 gcgaattggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcg 165
>41210_ccl-MIR168:mirbase
Length = 176
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaac 41
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 174 gcgaattggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcg 164
>41101_tcc-MIR168:mirbase
Length = 167
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaac 42
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 175 cgaattggatcccgccttgcatcaactgaatcg 207
|||||||||||||||||||||||||||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcg 149
>40448_gma-MIR168:mirbase
Length = 125
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaaccg 38
||||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaaccg 42
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 175 cgaattggatcccgccttgcatcaactgaatcg 207
|||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcg 110
>41596_vvi-MIR168:mirbase
Length = 132
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaaccg 38
||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccg 34
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 182 gatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcg 124
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 174 gcgaattggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactgaatcg 156
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaac 36
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>40355_rco-MIR168:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 176 gaattggatcccgccttgcatcaactgaatcgaa 209
||||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcgaa 130
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 ctaattcgcttggtgcaggtcgggaac 36
|||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaac 27
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 176 gaattggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcg 132
>40043_ath-MIR168a:mirbase
Length = 138
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 178 attggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcg 125
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaacc 37
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>39832_aly-MIR168a:mirbase
Length = 155
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 178 attggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcg 131
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaacc 37
|||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46
>40044_ath-MIR168b:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaac 36
|||||||||| ||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaac 36
|||||||||| ||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaac 64
>40271_bna-MIR168:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 cggcggtctctaattcgcttggtgcaggtcgggaac 36
|||||| |||| | ||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaac 39
>42742_zma-MIR168b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 181 ggatcccgccttgcatcaactgaatcg 207
||||||||||||||||||| |||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcg 89
