miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41062_ghr-MIR399c:mirbase
          Length = 74

 Score =  147 bits (74), Expect = 1e-36
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  agggcttctctgcattggcaggtagatgataactccacatcatgtagttaacctgccaaa 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agggcttctctgcattggcaggtagatgataactccacatcatgtagttaacctgccaaa 60

                        
Query: 61 ggagagttggcctt 74
          ||||||||||||||
Sbjct: 61 ggagagttggcctt 74




>41247_csi-MIR399b:mirbase
          Length = 168

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  acctgccaaaggagagttg 69
           |||||||||||||||||||
Sbjct: 122 acctgccaaaggagagttg 140




>40093_ath-MIR399b:mirbase
          Length = 135

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  acctgccaaaggagagttg 69
           |||||||||||||||||||
Sbjct: 102 acctgccaaaggagagttg 120




>39885_aly-MIR399b:mirbase
          Length = 154

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  acctgccaaaggagagttg 69
           |||||||||||||||||||
Sbjct: 103 acctgccaaaggagagttg 121