miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40524_gma-MIR1525:mirbase
Length = 274
Score = 502 bits (253), Expect = e-143
Identities = 267/274 (97%)
Strand = Plus / Plus
Query: 1 tatataattttgggttaattaagtttttagtccctataaatattcatagttttgttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatataattttgggttaattaagtttttagtccctataaatattcatagttttgttttta 60
Query: 61 gtccctacaaaataagatcacactttttagtccttgtgacattttccttaagcattttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccctacaaaataagatcacactttttagtccttgtgacattttccttaagcattttag 120
Query: 121 ggactaaaactgttgatgaaannnnnnnacagggactaaaagtgccgatgaaaaaattta 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ggactaaaactgttgatgaaatttttttacagggactaaaagtgccgatgaaaaaattta 180
Query: 181 tagggactaaaaagtatgattttattttgtaaggactaaaaacaaaactgtgaatattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagggactaaaaagtatgattttattttgtaaggactaaaaacaaaactgtgaatattta 240
Query: 241 taggactaaaaacttaattaatcctataattttt 274
||||||||||||||||||||||||||||||||||
Sbjct: 241 taggactaaaaacttaattaatcctataattttt 274
Score = 109 bits (55), Expect = 1e-24
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 184 ggactaaaaagtatgattttattttgtaaggactaaaaacaaaactgtgaatatttata- 242
|||||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 93 ggactaaaaagtgtgatcttattttgtagggactaaaaacaaaactatgaatatttatag 34
Query: 243 ggactaaaaacttaattaa 261
|||||||||||||||||||
Sbjct: 33 ggactaaaaacttaattaa 15
Score = 109 bits (55), Expect = 1e-24
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 15 ttaattaagtttttagtccctataaatattcatagttttgtttttagtccctacaaaata 74
||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct: 261 ttaattaagtttttagtcc-tataaatattcacagttttgtttttagtccttacaaaata 203
Query: 75 agatcacactttttagtcc 93
| |||| ||||||||||||
Sbjct: 202 aaatcatactttttagtcc 184
>40794_mtr-MIR2589:mirbase
Length = 366
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 ttgggttaattaagtttttagtccctataaa 40
||||||||| || ||||||||||||||||||
Sbjct: 308 ttgggttaaatatgtttttagtccctataaa 278
