miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40526_gma-MIR1527:mirbase
Length = 241
Score = 478 bits (241), Expect = e-135
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 ctcacaagccggttttgtaaggttgagttagacctcaaatttcaacatggtatcagagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcacaagccggttttgtaaggttgagttagacctcaaatttcaacatggtatcagagcc 60
Query: 61 attgaaccacatgctatcaggtttccgctatcgggccaccccccatttatgtctacgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgaaccacatgctatcaggtttccgctatcgggccaccccccatttatgtctacgaac 120
Query: 121 caaacctaatagtgctgatcgtgagggggtgtgttaagagtcccacatcggataggacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaacctaatagtgctgatcgtgagggggtgtgttaagagtcccacatcggataggacat 180
Query: 181 ggtctgacaatatatttataaagttgaggcctaactcaaccttacaaaaccggcttgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtctgacaatatatttataaagttgaggcctaactcaaccttacaaaaccggcttgtga 240
Query: 241 g 241
|
Sbjct: 241 g 241
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 204 ttgaggcctaactcaaccttacaaaaccggcttgtgag 241
|||||| |||||||||||||||||||||||||||||||
Sbjct: 38 ttgaggtctaactcaaccttacaaaaccggcttgtgag 1
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1 ctcacaagccggttttgtaaggttgagttagacctcaa 38
||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 ctcacaagccggttttgtaaggttgagttaggcctcaa 204
