miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 159 bits (80), Expect = 2e-39
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttgatctattactaattagtttcctcttccttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tttggattgaagggagctctgcatcttgatctattactaattagtttcctcttccttctg 70
Query: 61 ctgcatgcaagcctggaaat 80
||||||||||||||||||||
Sbjct: 71 ctgcatgcaagcctggaaat 90
>41918_osa-MIR159b:mirbase
Length = 188
Score = 61.9 bits (31), Expect = 3e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttgatc 31
|||||||||||||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctctgcatcttgatc 188
>42691_zma-MIR159b:mirbase
Length = 221
Score = 56.0 bits (28), Expect = 2e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttg 28
||||||||||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctctgcatcttg 209
>41868_far-MIR159:mirbase
Length = 200
Score = 56.0 bits (28), Expect = 2e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttg 28
||||||||||||||||||||||||||||
Sbjct: 169 tttggattgaagggagctctgcatcttg 196
>42690_zma-MIR159a:mirbase
Length = 246
Score = 54.0 bits (27), Expect = 6e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttgatc 31
||||||||||||||||||||||||| |||||
Sbjct: 207 tttggattgaagggagctctgcatcctgatc 237
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 54.0 bits (27), Expect = 6e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttgatc 31
||||||||||||||||||||||||| |||||
Sbjct: 223 tttggattgaagggagctctgcatcctgatc 253
>42455_sof-MIR159d:mirbase
Length = 265
Score = 54.0 bits (27), Expect = 6e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttgatc 31
||||||||||||||||||||||||| |||||
Sbjct: 226 tttggattgaagggagctctgcatcctgatc 256
>42452_sof-MIR159a:mirbase
Length = 265
Score = 54.0 bits (27), Expect = 6e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttgatc 31
||||||||||||||||||||||||| |||||
Sbjct: 226 tttggattgaagggagctctgcatcctgatc 256
>41917_osa-MIR159a:mirbase
Length = 272
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatctt 27
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatctt 27
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>42635_tae-MIR159b:mirbase
Length = 255
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatct 26
||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>42453_sof-MIR159b:mirbase
Length = 266
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatc 25
|||||||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctctgcatc 251
>42634_tae-MIR159a:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcat 24
||||||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctctgcat 177
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 4e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatcttg 28
|||||||||||||||||||| |||||||
Sbjct: 152 tttggattgaagggagctctacatcttg 179
>42494_sbi-MIR159:mirbase
Length = 226
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgca 23
|||||||||||||||||||||||
Sbjct: 204 tttggattgaagggagctctgca 226
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgca 23
|||||||||||||||||||||||
Sbjct: 156 tttggattgaagggagctctgca 178
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 2e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatctt 27
|||||||||||||||||||| ||||||
Sbjct: 183 tttggattgaagggagctctacatctt 209
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgc 22
||||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctctgc 200
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgc 22
||||||||||||||||||||||
Sbjct: 231 tttggattgaagggagctctgc 252
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgc 22
||||||||||||||||||||||
Sbjct: 194 tttggattgaagggagctctgc 215
>40338_rco-MIR159:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatct 26
|||||||||||||||||||| |||||
Sbjct: 155 tttggattgaagggagctctacatct 180
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatct 26
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctctgcatct 26
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41218_csi-MIR159:mirbase
Length = 216
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctct 205
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>40397_ahy-MIR159:mirbase
Length = 197
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>40016_ath-MIR159a:mirbase
Length = 184
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tttggattgaagggagctct 20
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
