miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40741_mtr-MIR399k:mirbase
Length = 94
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 taggggaaatctcttttggcagagaggagtagctagagagcttgaacatgcttgcttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 taggggaaatctcttttggcagagaggagtagctagagagcttgaacatgcttgcttcta 65
Query: 61 gtttgccaaagaagatttgccctg 84
||||||||||||||||||||||||
Sbjct: 66 gtttgccaaagaagatttgccctg 89
>40739_mtr-MIR399i:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 34 tagagagcttgaacatgcttgcttctagtttgccaaagaagatttgccctg 84
|||| |||||| |||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 35 tagaaagcttggacatgcatgcttctggtttgccaaaggagatttgccctg 85
>40738_mtr-MIR399h:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 34 tagagagcttgaacatgcttgcttctagtttgccaaagaagatttgccctg 84
|||| |||||| |||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 35 tagaaagcttggacatgcatgcttctggtttgccaaaggagatttgccctg 85
>40733_mtr-MIR399c:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 taggggaaatctcttttggcagagaggagta 31
||||| |||||||||||||||||||||||||
Sbjct: 21 tagggaaaatctcttttggcagagaggagta 51
>41452_ptc-MIR399e:mirbase
Length = 114
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 64 tgccaaagaagatttgccc 82
|||||||||||||||||||
Sbjct: 85 tgccaaagaagatttgccc 103
>41451_ptc-MIR399d:mirbase
Length = 114
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 64 tgccaaagaagatttgccc 82
|||||||||||||||||||
Sbjct: 85 tgccaaagaagatttgccc 103
>41063_ghr-MIR399d:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 62 tttgccaaagaagatttgccctg 84
|||||||||| ||||||||||||
Sbjct: 65 tttgccaaaggagatttgccctg 87
