miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42227_osa-MIR1846a:mirbase
Length = 112
Score = 101 bits (51), Expect = 8e-23
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 1 caatgagccgtcggatctcctagtaaggaggccggggccgtcagatccggtgaccccggt 60
|||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||| |
Sbjct: 12 caatgagccgccggatctcccagtgaggaggccggggccgctggatccggtgaccccgtt 71
Query: 61 ctcctcaccggcggatccggcgc 83
|||||| ||||||||||||||||
Sbjct: 72 ctcctcgccggcggatccggcgc 94
>42226_osa-MIR1846a:mirbase
Length = 112
Score = 101 bits (51), Expect = 8e-23
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 1 caatgagccgtcggatctcctagtaaggaggccggggccgtcagatccggtgaccccggt 60
|||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||| |
Sbjct: 12 caatgagccgccggatctcccagtgaggaggccggggccgctggatccggtgaccccgtt 71
Query: 61 ctcctcaccggcggatccggcgc 83
|||||| ||||||||||||||||
Sbjct: 72 ctcctcgccggcggatccggcgc 94
>42229_osa-MIR1846b:mirbase
Length = 112
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 1 caatgagccgtcggatctcctagtaaggaggccggggccgtcagatccggtgaccccggt 60
|||||||||| ||||||||| ||| ||||||||||||||| ||||| ||||||||| |
Sbjct: 12 caatgagccgccggatctcccagtgaggaggccggggccgctggatccagtgaccccgtt 71
Query: 61 ctcctcaccggcggatccgg 80
|||||| |||||||||||||
Sbjct: 72 ctcctcgccggcggatccgg 91
>42228_osa-MIR1846b:mirbase
Length = 112
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 1 caatgagccgtcggatctcctagtaaggaggccggggccgtcagatccggtgaccccggt 60
|||||||||| ||||||||| ||| ||||||||||||||| ||||| ||||||||| |
Sbjct: 12 caatgagccgccggatctcccagtgaggaggccggggccgctggatccagtgaccccgtt 71
Query: 61 ctcctcaccggcggatccgg 80
|||||| |||||||||||||
Sbjct: 72 ctcctcgccggcggatccgg 91
>42231_osa-MIR1846c:mirbase
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 3 atgagccgtcggatctcctagtaaggaggccggggccgtcagatccggtgaccccggtct 62
|||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||
Sbjct: 1 atgagccgccggatctcccagtgaggaggccggggccgctgaatccggtgaccccggtct 60
Query: 63 cctcaccggcggatccggcgccaaga 88
||| | |||||||||||||| ||||
Sbjct: 61 gctcgctggcggatccggcgcaaaga 86
>42230_osa-MIR1846c:mirbase
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 3 atgagccgtcggatctcctagtaaggaggccggggccgtcagatccggtgaccccggtct 62
|||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||
Sbjct: 1 atgagccgccggatctcccagtgaggaggccggggccgctgaatccggtgaccccggtct 60
Query: 63 cctcaccggcggatccggcgccaaga 88
||| | |||||||||||||| ||||
Sbjct: 61 gctcgctggcggatccggcgcaaaga 86
>42233_osa-MIR1846d:mirbase
Length = 116
Score = 81.8 bits (41), Expect = 8e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 12 cggatctcctagtaaggaggccggggccgtcagatccggtgaccccggtctcctcaccgg 71
||||||||| ||| || ||||| |||||| ||||||||||||||||||||||||| ||||
Sbjct: 25 cggatctcccagtgagtaggcccgggccgccagatccggtgaccccggtctcctcgccgg 84
Query: 72 cggatccggcgcc 84
| ||||||||||
Sbjct: 85 tgtatccggcgcc 97
>42232_osa-MIR1846d:mirbase
Length = 116
Score = 81.8 bits (41), Expect = 8e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 12 cggatctcctagtaaggaggccggggccgtcagatccggtgaccccggtctcctcaccgg 71
||||||||| ||| || ||||| |||||| ||||||||||||||||||||||||| ||||
Sbjct: 25 cggatctcccagtgagtaggcccgggccgccagatccggtgaccccggtctcctcgccgg 84
Query: 72 cggatccggcgcc 84
| ||||||||||
Sbjct: 85 tgtatccggcgcc 97
>42234_osa-MIR1846e:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 4e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 26 aggaggccggggccgtcagatccggtgaccccggtctcctcaccggcggatccgg 80
||||||||||| || | ||||||||||| |||| |||||| ||||| |||||||
Sbjct: 15 aggaggccgggaccaccggatccggtgactccggcctcctcgccggcagatccgg 69
