miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32329_mmu-mir-709:mirbase
          Length = 88

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 134 cagcactggggaggcagaggcaggaggat 162
           |||||||||||||||||||||||||||||
Sbjct: 60  cagcactggggaggcagaggcaggaggat 88




>32440_mmu-mir-1935:mirbase
          Length = 60

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 143 ggaggcagaggcaggaggatctctgagt 170
           |||||||||||| || ||||||||||||
Sbjct: 6   ggaggcagaggctggcggatctctgagt 33




>32574_mmu-mir-3470b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 134 cagcactggggaggcagaggcagg 157
           ||||||| ||||||||||||||||
Sbjct: 97  cagcactcgggaggcagaggcagg 74