miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>26591_tgu-mir-2985-2:mirbase
          Length = 81

 Score =  105 bits (53), Expect = 6e-24
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                      
Query: 6  agggttcctcattaaggtgggtggaatagtataacaatagatcatgcattgttatagtat 65
          |||||||  |||||||||||||||||||||||||||||| |  |||  ||||||||||||
Sbjct: 1  agggttctccattaaggtgggtggaatagtataacaatataaaatgtgttgttatagtat 60

                               
Query: 66 tccaccttccctgatgtccct 86
          |||||||||||||||||||||
Sbjct: 61 tccaccttccctgatgtccct 81




>33021_rno-mir-2985:mirbase
          Length = 110

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 11 tcctcattaaggtgggtggaatagtataacaat 43
          |||||||||||||||||||||||||||||||||
Sbjct: 19 tcctcattaaggtgggtggaatagtataacaat 51




>26590_tgu-mir-2985-1:mirbase
          Length = 83

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 14 tcattaaggtgggtggaatagtataacaata 44
          |||||||||||||||||||||||||||||||
Sbjct: 9  tcattaaggtgggtggaatagtataacaata 39