miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28108_mml-mir-671:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 66
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>28109_mml-mir-671:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 66
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>28988_hsa-mir-671:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 66
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>28989_hsa-mir-671:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 66
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>30588_ptr-mir-671:mirbase
Length = 117
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 65
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 66 ctccggttctcagggctccacctctttcgggccgtagagcc 106
>31233_ppy-mir-671:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 66
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>31234_ppy-mir-671:mirbase
Length = 118
Score = 176 bits (89), Expect = 2e-45
Identities = 99/101 (98%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttc 66
Query: 60 ctccggttctcagggctccacctctttcgagccgtagagcc 100
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>32284_mmu-mir-671:mirbase
Length = 98
Score = 176 bits (89), Expect = 2e-45
Identities = 96/97 (98%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 5 tggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttcctcc 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctcc 60
Query: 64 ggttctcagggctccacctctttcgagccgtagagcc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttctcagggctccacctctttcgagccgtagagcc 97
>32285_mmu-mir-671:mirbase
Length = 98
Score = 176 bits (89), Expect = 2e-45
Identities = 96/97 (98%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 5 tggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttcctcc 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctcc 60
Query: 64 ggttctcagggctccacctctttcgagccgtagagcc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttctcagggctccacctctttcgagccgtagagcc 97
>33447_bta-mir-671:mirbase
Length = 118
Score = 147 bits (74), Expect = 2e-36
Identities = 93/98 (94%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 4 ctggcaggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttcctc 62
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ctggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctc 69
Query: 63 cggttctcagggctccacctctttcgagccgtagagcc 100
|||||||||||||||||||| || || ||||| |||||
Sbjct: 70 cggttctcagggctccaccttttccgggccgtggagcc 107
>32974_rno-mir-671:mirbase
Length = 81
Score = 145 bits (73), Expect = 7e-36
Identities = 80/81 (98%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 13 caggaagaggag-aagccctggaggggctggaggtgatggatgttttcctccggttctca 71
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctca 60
Query: 72 gggctccacctctttcgagcc 92
|||||||||||||||||||||
Sbjct: 61 gggctccacctctttcgagcc 81
>27253_eca-mir-671:mirbase
Length = 84
Score = 137 bits (69), Expect = 2e-33
Identities = 76/77 (98%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 10 ggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttcctccggttc 68
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttc 60
Query: 69 tcagggctccacctctt 85
|||||||||||||||||
Sbjct: 61 tcagggctccacctctt 77
>27254_eca-mir-671:mirbase
Length = 84
Score = 137 bits (69), Expect = 2e-33
Identities = 76/77 (98%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 10 ggccaggaagaggag-aagccctggaggggctggaggtgatggatgttttcctccggttc 68
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttc 60
Query: 69 tcagggctccacctctt 85
|||||||||||||||||
Sbjct: 61 tcagggctccacctctt 77
>26899_cfa-mir-671:mirbase
Length = 74
Score = 131 bits (66), Expect = 1e-31
Identities = 73/74 (98%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 13 caggaagaggag-aagccctggaggggctggaggtgatggatgttttcctccggttctca 71
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctca 60
Query: 72 gggctccacctctt 85
||||||||||||||
Sbjct: 61 gggctccacctctt 74
