miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>32574_mmu-mir-3470b:mirbase
          Length = 126

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 15  cgggcagtggtggcacacgcctttaatctcagcacttgggaggcagaggtaggcagattt 74
           |||||| |||| || || ||||||| || ||||||| |||||||||||| |||   ||||
Sbjct: 126 cgggcattggtagcgcatgcctttagtcccagcactcgggaggcagaggcaggtgaattt 67

                                            
Query: 75  ctgagtttgagtccagcctggtctacagagtga 107
            ||||||  || |||||||||||||||||||||
Sbjct: 66  ttgagttcaaggccagcctggtctacagagtga 34




>32440_mmu-mir-1935:mirbase
          Length = 60

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 53  ggaggcagaggtaggcagatttctgagtttgagtccagcctggtctacagagtga 107
           |||||||||||  ||| ||| |||||||| ||| |||||||||||||||||||||
Sbjct: 6   ggaggcagaggctggcggatctctgagttcgaggccagcctggtctacagagtga 60




>32449_mmu-mir-1946a:mirbase
          Length = 134

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                      
Query: 13 gccgggcagtggtggcacacgcctttaatctcagcacttgggaggcagaggtaggcagat 72
          |||||||||||||||||||| | ||||||| || |||||| |||||| ||| |||  |||
Sbjct: 19 gccgggcagtggtggcacacacttttaatcccaacacttgtgaggcacaggcaggtggat 78

                
Query: 73 ttctga 78
          ||||||
Sbjct: 79 ttctga 84




>32380_mmu-mir-1186:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                            
Query: 13 gccgggcagtggtggcacacgcctttaatctcagcacttgggaggcagag 62
          |||||||||||||||  || |||||||||  ||||||| |||||||||||
Sbjct: 59 gccgggcagtggtggtgcatgcctttaattccagcactcgggaggcagag 10




>32450_mmu-mir-1946b:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 16 gggcagtggtggcacacgcctttaatc 42
          ||||||||||||| |||||||||||||
Sbjct: 29 gggcagtggtggcgcacgcctttaatc 3



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 13  gccgggcagtggtggcacacgcctttaatc 42
           ||||||||||||||||||| || |||||||
Sbjct: 100 gccgggcagtggtggcacatgcttttaatc 129