miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42312_osa-MIR1883b:mirbase
          Length = 136

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 89/102 (87%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggtatctagtcacctgtgacgggtctagaatggaatccgtcagag--aaacacctttg 58
           ||||||||||||||||||||||||| | |||||||||||||||| ||  | |||||||||
Sbjct: 17  caggtatctagtcacctgtgacgggccgagaatggaatccgtcaaaggaacacacctttg 76

                                                     
Query: 59  tcggcttccacttctggcccgtcacaagtgactagatacctg 100
           || | ||| |||||  |||| ||||| |||||||||||||||
Sbjct: 77  tcagattctacttcctgcccatcacaggtgactagatacctg 118



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 74  ggcccgtcacaagtgactagatacctg 100
           ||||||||||| |||||||||||||||
Sbjct: 43  ggcccgtcacaggtgactagatacctg 17



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   caggtatctagtcacctgtga 21
           |||||||||||||||||||||
Sbjct: 118 caggtatctagtcacctgtga 98




>42311_osa-MIR1883a:mirbase
          Length = 118

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 85/99 (85%), Gaps = 2/99 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggtatctagtcacctgtgacgggtctagaatggaatccgtcagagaaacacctttgtc 60
           |||| ||||||||||||||||||| || ||||||||| |||||||||     |||||| |
Sbjct: 108 caggcatctagtcacctgtgacggatcgagaatggaacccgtcagaggtgtccctttgac 49

                                                  
Query: 61  ggcttccacttct-ggcccgtcacaagtgactagatacc 98
           || ||||| |||| ||||||||||| |||||||||||||
Sbjct: 48  gggttcca-ttctcggcccgtcacaggtgactagatacc 11



 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 84/99 (84%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggtatctagtcacctgtgacgggtctagaatggaatccgtcagagaaacacctttgtcgg 62
           ||||||||||||||||||||||| | ||||||||| |||||| ||  |||||| || |||
Sbjct: 11  ggtatctagtcacctgtgacgggccgagaatggaacccgtcaaagggacacctctgacgg 70

                                                  
Query: 63  cttccacttct-ggcccgtcacaagtgactagatacctg 100
            ||||| |||| |  |||||||| |||||||||| ||||
Sbjct: 71  gttcca-ttctcgatccgtcacaggtgactagatgcctg 108