miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39377_pab-MIR166b:mirbase
          Length = 129

 Score =  147 bits (74), Expect = 1e-36
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatttgaaggcaggctgttgaagattatctcggaccaggcttcattccttgcatccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  atgatttgaaggcaggctgttgaagattatctcggaccaggcttcattccttgcatccaa 99

                         
Query: 61  actctttaagtact 74
           ||||||||||||||
Sbjct: 100 actctttaagtact 113




>40669_mtr-MIR166b:mirbase
          Length = 170

 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 25  gattatctcggaccaggcttcattcct 51
           |||||||||||||||||||||||||||
Sbjct: 138 gattatctcggaccaggcttcattcct 164




>41336_ptc-MIR166o:mirbase
          Length = 324

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 29  atctcggaccaggcttcattcctt 52
           ||||||||||||||||||||||||
Sbjct: 293 atctcggaccaggcttcattcctt 316




>41335_ptc-MIR166n:mirbase
          Length = 331

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 29  atctcggaccaggcttcattcctt 52
           ||||||||||||||||||||||||
Sbjct: 300 atctcggaccaggcttcattcctt 323




>41169_aqc-MIR166c:mirbase
          Length = 116

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 29  atctcggaccaggcttcattcctt 52
           ||||||||||||||||||||||||
Sbjct: 86  atctcggaccaggcttcattcctt 109




>42728_zma-MIR166l:mirbase
          Length = 137

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 29  atctcggaccaggcttcattcct 51
           |||||||||||||||||||||||
Sbjct: 95  atctcggaccaggcttcattcct 117




>41943_osa-MIR166g:mirbase
          Length = 145

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 29  atctcggaccaggcttcattcct 51
           |||||||||||||||||||||||
Sbjct: 112 atctcggaccaggcttcattcct 134




>41748_bdi-MIR166f:mirbase
          Length = 145

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 29  atctcggaccaggcttcattcct 51
           |||||||||||||||||||||||
Sbjct: 91  atctcggaccaggcttcattcct 113




>41583_vvi-MIR166a:mirbase
          Length = 130

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 29  atctcggaccaggcttcattcct 51
           |||||||||||||||||||||||
Sbjct: 97  atctcggaccaggcttcattcct 119




>41338_ptc-MIR166q:mirbase
          Length = 151

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 30  tctcggaccaggcttcattcctt 52
           |||||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcctt 143




>41096_tcc-MIR166c:mirbase
          Length = 141

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 29  atctcggaccaggcttcattcct 51
           |||||||||||||||||||||||
Sbjct: 98  atctcggaccaggcttcattcct 120




>40673_mtr-MIR166f:mirbase
          Length = 179

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 29  atctcggaccaggcttcattcct 51
           |||||||||||||||||||||||
Sbjct: 151 atctcggaccaggcttcattcct 173




>42721_zma-MIR166e:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 64 atctcggaccaggcttcattcc 85




>42720_zma-MIR166d:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 81  atctcggaccaggcttcattcc 102




>42719_zma-MIR166c:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 69 atctcggaccaggcttcattcc 90




>42718_zma-MIR166b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 93  atctcggaccaggcttcattcc 114




>42717_zma-MIR166a:mirbase
          Length = 213

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 186 atctcggaccaggcttcattcc 207




>42518_sbi-MIR166k:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 30  tctcggaccaggcttcattcct 51
           ||||||||||||||||||||||
Sbjct: 81  tctcggaccaggcttcattcct 102




>42515_sbi-MIR166h:mirbase
          Length = 185

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 159 atctcggaccaggcttcattcc 180




>42511_sbi-MIR166d:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 64 atctcggaccaggcttcattcc 85




>42508_sbi-MIR166a:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 85  atctcggaccaggcttcattcc 106




>41940_osa-MIR166d:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 88  atctcggaccaggcttcattcc 109




>41938_osa-MIR166b:mirbase
          Length = 206

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 165 atctcggaccaggcttcattcc 186




>41937_osa-MIR166a:mirbase
          Length = 145

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 107 atctcggaccaggcttcattcc 128




>41747_bdi-MIR166e:mirbase
          Length = 151

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 96  atctcggaccaggcttcattcc 117




>41745_bdi-MIR166c:mirbase
          Length = 172

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 118 atctcggaccaggcttcattcc 139




>41744_bdi-MIR166b:mirbase
          Length = 244

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 189 atctcggaccaggcttcattcc 210




>41590_vvi-MIR166h:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 66 atctcggaccaggcttcattcc 87




>41329_ptc-MIR166h:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 69 atctcggaccaggcttcattcc 90




>41328_ptc-MIR166g:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 71 atctcggaccaggcttcattcc 92




>41223_csi-MIR166b:mirbase
          Length = 192

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 148 atctcggaccaggcttcattcc 169




>41213_crt-MIR166a:mirbase
          Length = 202

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 158 atctcggaccaggcttcattcc 179




>41097_tcc-MIR166d:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 76 atctcggaccaggcttcattcc 97




>41095_tcc-MIR166b:mirbase
          Length = 178

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 136 atctcggaccaggcttcattcc 157




>40675_mtr-MIR166h:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 64 atctcggaccaggcttcattcc 85




>40670_mtr-MIR166c:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tctcggaccaggcttcattcct 51
          ||||||||||||||||||||||
Sbjct: 78 tctcggaccaggcttcattcct 99




>40668_mtr-MIR166:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 79  atctcggaccaggcttcattcc 100




>40350_rco-MIR166d:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atctcggaccaggcttcattcc 50
          ||||||||||||||||||||||
Sbjct: 64 atctcggaccaggcttcattcc 85




>39822_aly-MIR166b:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  atctcggaccaggcttcattcc 50
           ||||||||||||||||||||||
Sbjct: 107 atctcggaccaggcttcattcc 128




>42725_zma-MIR166i:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tctcggaccaggcttcattcc 50
          |||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81




>42516_sbi-MIR166i:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tctcggaccaggcttcattcc 50
          |||||||||||||||||||||
Sbjct: 64 tctcggaccaggcttcattcc 84




>41942_osa-MIR166f:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tctcggaccaggcttcattcc 50
          |||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90




>41334_ptc-MIR166m:mirbase
          Length = 105

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tctcggaccaggcttcattcc 50
          |||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcc 94




>41167_aqc-MIR166a:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  ctcggaccaggcttcattcct 51
           |||||||||||||||||||||
Sbjct: 85  ctcggaccaggcttcattcct 105




>41025_pvu-MIR166a:mirbase
          Length = 670

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 226 tctcggaccaggcttcattcc 246




>40674_mtr-MIR166g:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 80  tctcggaccaggcttcattcc 100




>40440_gma-MIR166b:mirbase
          Length = 167

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146




>40267_bna-MIR166d:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tctcggaccaggcttcattcc 50
          |||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95




>40038_ath-MIR166g:mirbase
          Length = 122

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 83  tctcggaccaggcttcattcc 103




>40035_ath-MIR166d:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 85  tctcggaccaggcttcattcc 105




>40034_ath-MIR166c:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121




>39827_aly-MIR166g:mirbase
          Length = 131

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 87  tctcggaccaggcttcattcc 107




>39824_aly-MIR166d:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 85  tctcggaccaggcttcattcc 105




>39823_aly-MIR166c:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 93  tctcggaccaggcttcattcc 113




>39734_smo-MIR166b:mirbase
          Length = 136

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 97  tctcggaccaggcttcattcc 117




>39733_smo-MIR166a:mirbase
          Length = 145

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  tctcggaccaggcttcattcc 50
           |||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126




>42729_zma-MIR166m:mirbase
          Length = 156

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  tcggaccaggcttcattcct 51
           ||||||||||||||||||||
Sbjct: 117 tcggaccaggcttcattcct 136




>42517_sbi-MIR166j:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  ctcggaccaggcttcattcc 50
           ||||||||||||||||||||
Sbjct: 84  ctcggaccaggcttcattcc 103




>42513_sbi-MIR166f:mirbase
          Length = 139

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  tcggaccaggcttcattcct 51
           ||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcct 119




>41949_osa-MIR166m:mirbase
          Length = 200

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  ctcggaccaggcttcattcc 50
           ||||||||||||||||||||
Sbjct: 146 ctcggaccaggcttcattcc 165




>41944_osa-MIR166h:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  tcggaccaggcttcattcct 51
           ||||||||||||||||||||
Sbjct: 89  tcggaccaggcttcattcct 108




>41586_vvi-MIR166d:mirbase
          Length = 160

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  ctcggaccaggcttcattcc 50
           ||||||||||||||||||||
Sbjct: 128 ctcggaccaggcttcattcc 147




>41584_vvi-MIR166b:mirbase
          Length = 99

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 32 tcggaccaggcttcattcct 51
          ||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcct 87




>41333_ptc-MIR166l:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 ctcggaccaggcttcattcc 50
          ||||||||||||||||||||
Sbjct: 67 ctcggaccaggcttcattcc 86




>41330_ptc-MIR166i:mirbase
          Length = 103

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 ctcggaccaggcttcattcc 50
          ||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcc 92




>41170_aqc-MIR166d:mirbase
          Length = 129

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  tcggaccaggcttcattcct 51
           ||||||||||||||||||||
Sbjct: 105 tcggaccaggcttcattcct 124




>40347_rco-MIR166a:mirbase
          Length = 149

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  ctcggaccaggcttcattcc 50
           ||||||||||||||||||||
Sbjct: 123 ctcggaccaggcttcattcc 142




>39469_ppt-MIR166f:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 ctcggaccaggcttcattcc 50
          ||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcc 92




>39376_pab-MIR166a:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 32 tcggaccaggcttcattcct 51
          ||||||||||||||||||||
Sbjct: 55 tcggaccaggcttcattcct 74