miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39513_ppt-MIR533c:mirbase
Length = 171
Score = 339 bits (171), Expect = 4e-94
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 1 agtgtttgaaagagggttagcgacattgagagctgttcagactatgagaaagtgtgtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgtttgaaagagggttagcgacattgagagctgttcagactatgagaaagtgtgtgga 60
Query: 61 agaggatttggtgacttgaactggtgcttcaaggaaagcctaaagtccaagttccactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaggatttggtgacttgaactggtgcttcaaggaaagcctaaagtccaagttccactct 120
Query: 121 tgctctcacagtctgcacagctctctgtatctcttcccctagtatatgtct 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctctcacagtctgcacagctctctgtatctcttcccctagtatatgtct 171
>39512_ppt-MIR533b:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 125 ctcacagtctgcacagctctctgtatctcttcc 157
||||||||||| |||||||||||||||||||||
Sbjct: 90 ctcacagtctgtacagctctctgtatctcttcc 122
>39511_ppt-MIR533b:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 125 ctcacagtctgcacagctctctgtatctcttcc 157
||||||||||| |||||||||||||||||||||
Sbjct: 90 ctcacagtctgtacagctctctgtatctcttcc 122
>39514_ppt-MIR533d:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 ctcacagtctgcacagctctctgt 148
||||||||||||||||||||||||
Sbjct: 92 ctcacagtctgcacagctctctgt 115
>39510_ppt-MIR533a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 125 ctcacagtctgcacagctctc 145
|||||||||||||||||||||
Sbjct: 79 ctcacagtctgcacagctctc 99
