miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39514_ppt-MIR533d:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 cagcatcagctcaggggcagtagcatggagagctgttcagactctgagagaggggtgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcatcagctcaggggcagtagcatggagagctgttcagactctgagagaggggtgtgg 60
Query: 61 aaaacatgtactgttgtatcgacactcgtcgctcacagtctgcacagctctctgtgttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaacatgtactgttgtatcgacactcgtcgctcacagtctgcacagctctctgtgttgc 120
Query: 121 tccctctaattgacttca 138
||||||||||||||||||
Sbjct: 121 tccctctaattgacttca 138
>39513_ppt-MIR533c:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 ctcacagtctgcacagctctctgt 115
||||||||||||||||||||||||
Sbjct: 125 ctcacagtctgcacagctctctgt 148
>39510_ppt-MIR533a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 ctcacagtctgcacagctctc 112
|||||||||||||||||||||
Sbjct: 79 ctcacagtctgcacagctctc 99
>39512_ppt-MIR533b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 ctcacagtctgcacagctctctgt 115
||||||||||| ||||||||||||
Sbjct: 90 ctcacagtctgtacagctctctgt 113
>39511_ppt-MIR533b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 ctcacagtctgcacagctctctgt 115
||||||||||| ||||||||||||
Sbjct: 90 ctcacagtctgtacagctctctgt 113
