miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39515_ppt-MIR533e:mirbase
Length = 153
Score = 303 bits (153), Expect = 2e-83
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 1 gagtggttgtgcatgacgaggcagcgacagagagagctggccagactgtgagggatggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtggttgtgcatgacgaggcagcgacagagagagctggccagactgtgagggatggag 60
Query: 61 cgaatttagcttgtgccttgtgtggctcactcgtgcagctccctcacagtctgcatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaatttagcttgtgccttgtgtggctcactcgtgcagctccctcacagtctgcatggct 120
Query: 121 ctccgtgtctcttcctcttttcggccacgttgg 153
|||||||||||||||||||||||||||||||||
Sbjct: 121 ctccgtgtctcttcctcttttcggccacgttgg 153
>39512_ppt-MIR533b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 99 ctccctcacagtctgcatggctctccgtgtctcttcctct 138
||||||||||||||| | |||||| || |||||||||||
Sbjct: 86 ctccctcacagtctgtacagctctctgtatctcttcctct 125
>39511_ppt-MIR533b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 99 ctccctcacagtctgcatggctctccgtgtctcttcctct 138
||||||||||||||| | |||||| || |||||||||||
Sbjct: 86 ctccctcacagtctgtacagctctctgtatctcttcctct 125
>39510_ppt-MIR533a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 34 gagctggccagactgtgagggatggagc 61
||||||||||| |||||||||| |||||
Sbjct: 6 gagctggccaggctgtgagggacggagc 33
