miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39522_ppt-MIR536a:mirbase
Length = 199
Score = 394 bits (199), Expect = e-111
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 1 tgattccaccccttggatgtcactgcttggcacaatcctcttattgtgaatttcatgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgattccaccccttggatgtcactgcttggcacaatcctcttattgtgaatttcatgtcc 60
Query: 61 tctttcgtggttagtcgatagagttgtactacctttattcatccagtgttataaatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctttcgtggttagtcgatagagttgtactacctttattcatccagtgttataaatgttt 120
Query: 121 gtccagtgctagctcttcacttggggattgcacaacagggggttcgtgccaagctgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtccagtgctagctcttcacttggggattgcacaacagggggttcgtgccaagctgtgtg 180
Query: 181 caacctaagggtggtttta 199
|||||||||||||||||||
Sbjct: 181 caacctaagggtggtttta 199
>39526_ppt-MIR536e:mirbase
Length = 464
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 ttcgtgccaagctgtgtgcaacc 185
|||||||||||||||||||||||
Sbjct: 439 ttcgtgccaagctgtgtgcaacc 461
>39525_ppt-MIR536d:mirbase
Length = 443
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 ttcgtgccaagctgtgtgcaacc 185
|||||||||||||||||||||||
Sbjct: 396 ttcgtgccaagctgtgtgcaacc 418
>39523_ppt-MIR536b:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 ttcgtgccaagctgtgtgcaacc 185
|||||||||||||||||||||||
Sbjct: 151 ttcgtgccaagctgtgtgcaacc 173
>39527_ppt-MIR536f:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 163 ttcgtgccaagctgtgtgca 182
||||||||||||||||||||
Sbjct: 127 ttcgtgccaagctgtgtgca 146
