miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39431_pta-MIR482c:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 aggagtgggagggtaggagaaggctctgtggtgaggtctcagtcataatctcatcagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagtgggagggtaggagaaggctctgtggtgaggtctcagtcataatctcatcagtct 60
Query: 61 tccctattcctcccattcct 80
||||||||||||||||||||
Sbjct: 61 tccctattcctcccattcct 80
>39383_pab-MIR482a:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 taatctcatcagtcttccctattcctcccattcct 80
|||||||| |||||||||||| |||||||||||||
Sbjct: 66 taatctcaccagtcttccctactcctcccattcct 100
>39384_pab-MIR482b:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 agtcttccctattcctcccattcct 80
|||||||||||||||||||||||||
Sbjct: 74 agtcttccctattcctcccattcct 98
>39430_pta-MIR482b:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 cagtcttccctattcctcccattcct 80
|||||||||||| |||||||||||||
Sbjct: 66 cagtcttccctactcctcccattcct 91
>39429_pta-MIR482a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 cagtcttccctattcctcccattcct 80
|||||||||||| |||||||||||||
Sbjct: 66 cagtcttccctactcctcccattcct 91
>39385_pab-MIR482c:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 atcagtcttccctattcctcccattcct 80
||||||||| |||| |||||||||||||
Sbjct: 80 atcagtctttcctactcctcccattcct 107
>41259_csi-MIR482a:mirbase
Length = 129
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 tcttccctattcctcccattcct 80
|||||||||| ||||||||||||
Sbjct: 98 tcttccctatgcctcccattcct 120
