miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39436_pta-MIR947:mirbase
Length = 145
Score = 287 bits (145), Expect = 1e-78
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 1 acgcctaaggcgcagcagcagattctgatagaagactcaggcaaagcatttgttgttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgcctaaggcgcagcagcagattctgatagaagactcaggcaaagcatttgttgttggc 60
Query: 61 aggttgaatgctttcggcagaaccaccaataacaaggggggcgcctggtgtcttgcatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggttgaatgctttcggcagaaccaccaataacaaggggggcgcctggtgtcttgcatcg 120
Query: 121 gaatctgttactgtttcctaggcgt 145
|||||||||||||||||||||||||
Sbjct: 121 gaatctgttactgtttcctaggcgt 145
>39388_pab-MIR947:mirbase
Length = 133
Score = 83.8 bits (42), Expect = 3e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 acgcctaaggcgcagcagcagattctgatagaagactcaggcaaagcatttgttgttg 58
|||||| || |||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 76 acgcctcagacgcagcagcagattctgatagaagactcaggcaacgcatttgtcgttg 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 117 atcggaatctgttactgtttcctaggc 143
||||||||||||||||||||| |||||
Sbjct: 9 atcggaatctgttactgtttcttaggc 35
