miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39446_pta-MIR1311:mirbase
          Length = 86

 Score =  170 bits (86), Expect = 1e-43
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtaggaacaggcgggctggcataactccgcccatattttactgtcagagatggtcagagt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gtaggaacaggcgggctggcataactccgcccatattttactgtcagagatggtcagagt 60

                                    
Query: 61 tttgccagttccgcccattcctactg 86
          ||||||||||||||||||||||||||
Sbjct: 61 tttgccagttccgcccattcctactg 86




>39392_pab-MIR1311:mirbase
          Length = 88

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 50 atggtcagagttttgccagttccgcccattccta 83
          ||||||||||||||||||||||||||||||||||
Sbjct: 47 atggtcagagttttgccagttccgcccattccta 80