miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41352_ptc-MIR169ac:mirbase
Length = 107
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 tcttgtttgtagccaaggacgacttgcccacaatatgtatcgtgagcgtttccaatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgtttgtagccaaggacgacttgcccacaatatgtatcgtgagcgtttccaatttgc 60
Query: 61 aacctcatacttggtttgttttgggcagtctccttggctatgcagat 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacctcatacttggtttgttttgggcagtctccttggctatgcagat 107
>41353_ptc-MIR169ad:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccacaatatg 37
|||||||||||||||||||||||| ||||
Sbjct: 9 gtagccaaggacgacttgcccacactatg 37
>41355_ptc-MIR169af:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 9 gtagccaaggacgacttgcccac 31
>41354_ptc-MIR169ae:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 9 gtagccaaggacgacttgcccac 31
>41351_ptc-MIR169ab:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 9 gtagccaaggacgacttgcccac 31
>41375_ptc-MIR169u:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcc 28
||||||||||||||||||||
Sbjct: 10 gtagccaaggacgacttgcc 29
>41104_tcc-MIR169c:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 tgtagccaaggacgacttgcccac 31
||||||||| ||||||||||||||
Sbjct: 124 tgtagccaaagacgacttgcccac 101
