miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41390_ptc-MIR171j:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 ctaactcaagatattggcacagttcatcctcacagtggccttgatgaatgattcaaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaactcaagatattggcacagttcatcctcacagtggccttgatgaatgattcaaatct 60
Query: 61 atggttggattgagccgcgccaatactgtgtgcca 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 atggttggattgagccgcgccaatactgtgtgcca 95
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 91.7 bits (46), Expect = 8e-20
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 40 cttgatgaatgattcaaatctatggttggattgagccgcgccaata 85
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 cttgatgaatgattcaaatctatggttggattgagccgcgccaata 76
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tatggttggattgagccgcgccaata 85
||||||| ||||||||||||||||||
Sbjct: 72 tatggtttgattgagccgcgccaata 97
