miRNEST 2.0, an integrative microRNA resource :: BLAST
>41499_ptc-MIR479:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatga 60
Query: 61 agacgagccgaatcaatatcactct 85
|||||||||||||||||||||||||
Sbjct: 61 agacgagccgaatcaatatcactct 85
>41392_ptc-MIR171l:mirbase
Length = 112
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 ggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatga 74
Query: 61 agacgagccgaatcaatatcactct 85
|||||||||||||||||||||||||
Sbjct: 75 agacgagccgaatcaatatcactct 99
>41393_ptc-MIR171m:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 4e-12
Identities = 68/78 (87%), Gaps = 5/78 (6%)
Strand = Plus / Plus
Query: 8 tattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatgaagacgag 67
||||| ||||||||||||||||| || ||||| |||||||||| || |||||||||
Sbjct: 19 tattgatccggctcatcttctgt--atttgcatcagaagttcttcgct---gaagacgag 73
Query: 68 ccgaatcaatatcactct 85
||||||||||||||||||
Sbjct: 74 ccgaatcaatatcactct 91
>41394_ptc-MIR171n:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 tgaagacgagccgaatcaatatcactct 85
||||||||||||||||||||||||||||
Sbjct: 64 tgaagacgagccgaatcaatatcactct 91
>41258_csi-MIR479:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 agacgagccgaatcaatatcactct 85
|||||||||||||||||||||||||
Sbjct: 94 agacgagccgaatcaatatcactct 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ggtgtgatattggtccggctcatctt 26
|||||||||||||| |||||||||||
Sbjct: 18 ggtgtgatattggttcggctcatctt 43
>41232_csi-MIR171b:mirbase
Length = 165
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 agacgagccgaatcaatatcactct 85
|||||||||||||||||||||||||
Sbjct: 119 agacgagccgaatcaatatcactct 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ggtgtgatattggtccggctcatctt 26
|||||||||||||| |||||||||||
Sbjct: 43 ggtgtgatattggttcggctcatctt 68
>40456_gma-MIR171b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 agacgagccgaatcaatatcactct 85
|||||||||||||||||||||||||
Sbjct: 59 agacgagccgaatcaatatcactct 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 gtgatattggtccggctcatctt 26
||||||||||| |||||||||||
Sbjct: 11 gtgatattggtacggctcatctt 33
>40455_gma-MIR171b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 agacgagccgaatcaatatcactct 85
|||||||||||||||||||||||||
Sbjct: 59 agacgagccgaatcaatatcactct 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 gtgatattggtccggctcatctt 26
||||||||||| |||||||||||
Sbjct: 11 gtgatattggtacggctcatctt 33
>41686_vvi-MIR479:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 aagacgagccgaatcaatatcactct 85
||||||||||||| ||||||||||||
Sbjct: 59 aagacgagccgaaccaatatcactct 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 ggtgtgatattggtccggctcatcttct 28
|||||| ||||||| |||||||||||||
Sbjct: 9 ggtgtggtattggttcggctcatcttct 36
>41064_ghr-MIR479:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 cgagccgaatcaatatcactc 84
|||||||||||||||||||||
Sbjct: 63 cgagccgaatcaatatcactc 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 gtgatattggtccggctcatctt 26
||||||||||| |||||||||||
Sbjct: 18 gtgatattggttcggctcatctt 40
