miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41501_ptc-MIR480b:mirbase
Length = 140
Score = 278 bits (140), Expect = 1e-75
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1 taatatgtttggggttgatccttgtttagttataatagacccacacctgactgcttagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatatgtttggggttgatccttgtttagttataatagacccacacctgactgcttagaa 60
Query: 61 ttatttgttatcgcctatccgactacattattgacgttgaaaaacagagaactactacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatttgttatcgcctatccgactacattattgacgttgaaaaacagagaactactacat 120
Query: 121 cattgatgttgaaccataaa 140
||||||||||||||||||||
Sbjct: 121 cattgatgttgaaccataaa 140
>41500_ptc-MIR480a:mirbase
Length = 140
Score = 262 bits (132), Expect = 6e-71
Identities = 138/140 (98%)
Strand = Plus / Plus
Query: 1 taatatgtttggggttgatccttgtttagttataatagacccacacctgactgcttagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatatgtttggggttgatccttgtttagttataatagacccacacctgactgcttagaa 60
Query: 61 ttatttgttatcgcctatccgactacattattgacgttgaaaaacagagaactactacat 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatttgttatcgcatatccgactacattattgacgttgaaaaacagagaactactacat 120
Query: 121 cattgatgttgaaccataaa 140
|||||| |||||||||||||
Sbjct: 121 cattgacgttgaaccataaa 140
