miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41502_ptc-MIR481a:mirbase
Length = 93
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 4 ggttaagtgtgttggggtagtggagatggtcaaagatgttagagaataatataaatcata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggttaagtgtgttggggtagtggagatggtcaaagatgttagagaataatataaatcata 63
Query: 64 tcctaggacctcacttaacagcttaagcta 93
||||||||||||||||||||||||||||||
Sbjct: 64 tcctaggacctcacttaacagcttaagcta 93
>41505_ptc-MIR481d:mirbase
Length = 141
Score = 83.8 bits (42), Expect = 2e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 40 tgttagagaataatataaatcatatcctaggacctcacttaacagcttaagcta 93
||||||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 86 tgttagagaataatataaatcatattctaagacctcacctaacagcttaagcta 139
>41503_ptc-MIR481b:mirbase
Length = 220
Score = 75.8 bits (38), Expect = 5e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 40 tgttagagaataatataaatcatatcctaggacctcacttaacagcttaagcta 93
||||||||||||||||||||||||| || | ||||||| |||||||||||||||
Sbjct: 141 tgttagagaataatataaatcatattctggaacctcacctaacagcttaagcta 194
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 63 atcctaggacctcacttaacagcttaagcta 93
|||||||||||||||||||||||||||||||
Sbjct: 1 atcctaggacctcacttaacagcttaagcta 31
>41504_ptc-MIR481c:mirbase
Length = 195
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 63 atcctaggacctcacttaacagcttaagct 92
||||||||||||||||||||||||||||||
Sbjct: 1 atcctaggacctcacttaacagcttaagct 30
>41506_ptc-MIR481e:mirbase
Length = 196
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 63 atcctaggacctcacttaacagcttaagcta 93
||||||||||||||| |||||||||||||||
Sbjct: 1 atcctaggacctcacctaacagcttaagcta 31
