miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41514_ptc-MIR1444c:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 tttatccctcgaatattgatcgaatatgtatgaaatatgatggttaaatgtttcattcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttatccctcgaatattgatcgaatatgtatgaaatatgatggttaaatgtttcattcac 60
Query: 61 attcggtcaacgttcgagtgataaa 85
|||||||||||||||||||||||||
Sbjct: 61 attcggtcaacgttcgagtgataaa 85
>41513_ptc-MIR1444b:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 tttatccctcgaatattgatcgaatatgtatgaaatatgatggttaaatgtttcattcac 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tttatccctcgaatattgatcgaatatgtatgaaatatgatggttatatgtttcattcac 60
Query: 61 attcggtcaacgttcgagtgataaa 85
|||||||||||||||||||||||||
Sbjct: 61 attcggtcaacgttcgagtgataaa 85
>41512_ptc-MIR1444a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 51 tttcattcacattcggtcaacgttcgagtgataaa 85
|||||| || ||||||||||| ||| |||||||||
Sbjct: 36 tttcatccatattcggtcaacattcaagtgataaa 2
