miRNEST 2.0, an integrative microRNA resource :: BLAST
>32000_mmu-mir-335:mirbase
Length = 98
Score = 194 bits (98), Expect = 1e-50
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 19 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 60
Query: 79 cattattgctcctgaccccctctcatgggttatagcca 116
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattattgctcctgaccccctctcatgggttatagcca 98
>32001_mmu-mir-335:mirbase
Length = 98
Score = 194 bits (98), Expect = 1e-50
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 19 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 60
Query: 79 cattattgctcctgaccccctctcatgggttatagcca 116
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattattgctcctgaccccctctcatgggttatagcca 98
>32853_rno-mir-335:mirbase
Length = 98
Score = 170 bits (86), Expect = 2e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 19 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 60
Query: 79 cattattgctcctgaccccctctcatgggttatagcca 116
||||||||||||||||| |||||||| ||||||||||
Sbjct: 61 cattattgctcctgacctcctctcatttgttatagcca 98
>33325_bta-mir-335:mirbase
Length = 92
Score = 117 bits (59), Expect = 2e-27
Identities = 78/84 (92%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 21 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 80
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 1 ttttgggcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttca 56
Query: 81 ttattgctcctgaccccctctcat 104
||||||||||||||| ||||||||
Sbjct: 57 ttattgctcctgacctcctctcat 80
>34060_ssc-mir-335:mirbase
Length = 80
Score = 117 bits (59), Expect = 2e-27
Identities = 78/84 (92%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 20 cttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttc 79
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1 cttttgggcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttc 56
Query: 80 attattgctcctgaccccctctca 103
|||||||||||||||| |||||||
Sbjct: 57 attattgctcctgacctcctctca 80
>28584_hsa-mir-335:mirbase
Length = 94
Score = 109 bits (55), Expect = 5e-25
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 21 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 80
||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 3 ttttgagcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttca 58
Query: 81 ttattgctcctgaccccctctcat 104
||||||||||||||| ||||||||
Sbjct: 59 ttattgctcctgacctcctctcat 82
>30332_ptr-mir-335:mirbase
Length = 93
Score = 109 bits (55), Expect = 5e-25
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 21 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 80
||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2 ttttgagcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttca 57
Query: 81 ttattgctcctgaccccctctcat 104
||||||||||||||| ||||||||
Sbjct: 58 ttattgctcctgacctcctctcat 81
>30952_ppy-mir-335:mirbase
Length = 92
Score = 109 bits (55), Expect = 5e-25
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 21 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 80
||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 1 ttttgagcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttca 56
Query: 81 ttattgctcctgaccccctctcat 104
||||||||||||||| ||||||||
Sbjct: 57 ttattgctcctgacctcctctcat 80
>27847_mml-mir-335:mirbase
Length = 88
Score = 105 bits (53), Expect = 8e-24
Identities = 72/78 (92%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 27 gcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttcattattg 86
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3 gcgggggtcaagagcaataacgaaaaatgtttgt----cataaaccgtttttcattattg 58
Query: 87 ctcctgaccccctctcat 104
||||||||| ||||||||
Sbjct: 59 ctcctgacctcctctcat 76
>27128_eca-mir-335:mirbase
Length = 75
Score = 103 bits (52), Expect = 3e-23
Identities = 71/77 (92%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 27 gcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttcattattg 86
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 3 gcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttcattattg 58
Query: 87 ctcctgaccccctctca 103
||||||||| |||||||
Sbjct: 59 ctcctgacctcctctca 75
>26804_cfa-mir-335:mirbase
Length = 58
Score = 81.8 bits (41), Expect = 1e-16
Identities = 57/62 (91%), Gaps = 4/62 (6%)
Strand = Plus / Plus
Query: 34 tcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttcattattgctcctga 93
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1 tcaagagcaataacgaaaaatgtttgt----cataaaccgtttttcattattgctcctga 56
Query: 94 cc 95
||
Sbjct: 57 cc 58
