miRNEST 2.0, an integrative microRNA resource :: BLAST
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 159 bits (80), Expect = 5e-40
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 1 gaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacnnnnnnnt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 104 gaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacaaaaaaat 45
Query: 61 cttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 4
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 159 bits (80), Expect = 5e-40
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 1 gaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacnnnnnnnt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 104 gaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacaaaaaaat 45
Query: 61 cttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 4
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 87.7 bits (44), Expect = 1e-18
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 1 gaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacnnnnnnnt 60
||||| |||||||||||||||||||||||||||| |||| |||||| |||| |
Sbjct: 104 gaagcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaatt 45
Query: 61 cttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 101
|||||| |||||||||||||||||||||||||||||||
Sbjct: 44 ggccaggaagagatcgatgaaccgctgcctccagtgtcttc 4
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 63 tcaggaaaagatcgatgaaccgctgcctccagtgtctt 100
||||||| ||||||||||||||||||||||||||||||
Sbjct: 55 tcaggaagagatcgatgaaccgctgcctccagtgtctt 18
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||||||||||||||
Sbjct: 114 ctggatgcagaggtttatcgatcg 91
>41090_tcc-MIR162:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 64 caggaaaagatcgatgaaccgctgcctccagtgtctt 100
|||||| ||||||||||||||||||||||||||||||
Sbjct: 51 caggaagagatcgatgaaccgctgcctccagtgtctt 15
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||||||||||||||
Sbjct: 111 ctggatgcagaggtttatcgatcg 88
>40342_rco-MIR162:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 64 caggaaaagatcgatgaaccgctgcctccagtg 96
|||||| ||||||||||||||||||||||||||
Sbjct: 34 caggaagagatcgatgaaccgctgcctccagtg 2
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2 aagcactggatgcagaggtttatcgatcg 30
|||| ||||||||||||||||||||||||
Sbjct: 101 aagcgctggatgcagaggtttatcgatcg 73
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 64 caggaaaagatcgatgaaccgctgcctccagtg 96
|||||| ||||||||||||||||||||||||||
Sbjct: 43 caggaagagatcgatgaaccgctgcctccagtg 11
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcggttcgtgtt 39
|||||||||||||||||||||||| ||| ||||
Sbjct: 100 ctggatgcagaggtttatcgatcgattcatgtt 68
>41578_vvi-MIR162:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 62 ttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 101
|||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 41 ttcaggaagagatcgatgaaccgctgcatccagtgacttc 2
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcga 27
|||||||||||||||||||||
Sbjct: 93 ctggatgcagaggtttatcga 73
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 62 ttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 101
|||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 42 ttcaggaagagatcgatgaaccgctgcatccagtgacttc 3
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||||||||||||||
Sbjct: 93 ctggatgcagaggtttatcgatcg 70
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 62 ttcaggaaaagatcgatgaaccgctgcctccagtg 96
|||||||| |||||||||||||||||| |||||||
Sbjct: 53 ttcaggaacagatcgatgaaccgctgcatccagtg 19
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcga 27
|||||||||||||||||||||
Sbjct: 107 ctggatgcagaggtttatcga 87
>40024_ath-MIR162a:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 64 caggaaaagatcgatgaaccgctgcctccag 94
|||||| ||||||||||||||||||||||||
Sbjct: 55 caggaagagatcgatgaaccgctgcctccag 25
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatc 29
|||||||||||||||||||||||
Sbjct: 109 ctggatgcagaggtttatcgatc 87
>39812_aly-MIR162a:mirbase
Length = 228
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 64 caggaaaagatcgatgaaccgctgcctccag 94
|||||| ||||||||||||||||||||||||
Sbjct: 98 caggaagagatcgatgaaccgctgcctccag 68
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatc 29
|||||||||||||||||||||||
Sbjct: 156 ctggatgcagaggtttatcgatc 134
>41220_csi-MIR162:mirbase
Length = 201
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 72 gatcgatgaaccgctgcctccagtgtcttc 101
||||||||||||||||||||||||| ||||
Sbjct: 111 gatcgatgaaccgctgcctccagtgacttc 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||||||||||||||
Sbjct: 181 ctggatgcagaggtttatcgatcg 158
>41929_osa-MIR162a:mirbase
Length = 171
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 actggatgcagaggtttatcgatcg 30
|||||||||||||||||||||||||
Sbjct: 164 actggatgcagaggtttatcgatcg 140
>39813_aly-MIR162b:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2 aagcactggatgcagaggtttatcgatcg 30
|||| ||||||||||||||||||||||||
Sbjct: 138 aagcgctggatgcagaggtttatcgatcg 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 72 gatcgatgaaccgctgcctccag 94
|||||||||||||||||||||||
Sbjct: 72 gatcgatgaaccgctgcctccag 50
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||||||||||||||
Sbjct: 127 ctggatgcagaggtttatcgatcg 104
>40025_ath-MIR162b:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||||||||||||||
Sbjct: 99 ctggatgcagaggtttatcgatcg 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 72 gatcgatgaaccgctgcctccag 94
|||||||||||||||||||||||
Sbjct: 34 gatcgatgaaccgctgcctccag 12
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 ggatgcagaggtttatcgatcg 30
||||||||||||||||||||||
Sbjct: 129 ggatgcagaggtttatcgatcg 108
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcga 27
|||||||||||||||||||||
Sbjct: 130 ctggatgcagaggtttatcga 110
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcga 27
|||||||||||||||||||||
Sbjct: 99 ctggatgcagaggtttatcga 79
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 ctggatgcagaggtttatcgatcg 30
||||||||||||| ||||||||||
Sbjct: 124 ctggatgcagaggcttatcgatcg 101