miRNEST 2.0, an integrative microRNA resource :: BLAST
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 167 bits (84), Expect = 2e-42
Identities = 98/105 (93%)
Strand = Plus / Minus
Query: 1 gggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacnnnnnn 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacaaaaaa 47
Query: 61 ntcttcaggaaaagatcgatgaaccgctgcctccagtgtcttctc 105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atcttcaggaaaagatcgatgaaccgctgcctccagtgtcttctc 2
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 167 bits (84), Expect = 2e-42
Identities = 98/105 (93%)
Strand = Plus / Minus
Query: 1 gggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacnnnnnn 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacaaaaaa 47
Query: 61 ntcttcaggaaaagatcgatgaaccgctgcctccagtgtcttctc 105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atcttcaggaaaagatcgatgaaccgctgcctccagtgtcttctc 2
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 89.7 bits (45), Expect = 4e-19
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 2 ggaagcactggatgcagaggtttatcgatcggttcgtgttgttcgtgtaaaacnnnnnnn 61
|||||| |||||||||||||||||||||||||||| |||| |||||| ||||
Sbjct: 105 ggaagcgctggatgcagaggtttatcgatcggttcatgtttttcgtgctaaacaaaaaat 46
Query: 62 tcttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 103
| |||||| |||||||||||||||||||||||||||||||
Sbjct: 45 tggccaggaagagatcgatgaaccgctgcctccagtgtcttc 4
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 65 tcaggaaaagatcgatgaaccgctgcctccagtgtctt 102
||||||| ||||||||||||||||||||||||||||||
Sbjct: 55 tcaggaagagatcgatgaaccgctgcctccagtgtctt 18
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||||||||||||||
Sbjct: 114 ctggatgcagaggtttatcgatcg 91
>41090_tcc-MIR162:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 66 caggaaaagatcgatgaaccgctgcctccagtgtctt 102
|||||| ||||||||||||||||||||||||||||||
Sbjct: 51 caggaagagatcgatgaaccgctgcctccagtgtctt 15
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||||||||||||||
Sbjct: 111 ctggatgcagaggtttatcgatcg 88
>40342_rco-MIR162:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 66 caggaaaagatcgatgaaccgctgcctccagtg 98
|||||| ||||||||||||||||||||||||||
Sbjct: 34 caggaagagatcgatgaaccgctgcctccagtg 2
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 4 aagcactggatgcagaggtttatcgatcg 32
|||| ||||||||||||||||||||||||
Sbjct: 101 aagcgctggatgcagaggtttatcgatcg 73
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 66 caggaaaagatcgatgaaccgctgcctccagtg 98
|||||| ||||||||||||||||||||||||||
Sbjct: 43 caggaagagatcgatgaaccgctgcctccagtg 11
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcggttcgtgtt 41
|||||||||||||||||||||||| ||| ||||
Sbjct: 100 ctggatgcagaggtttatcgatcgattcatgtt 68
>41578_vvi-MIR162:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 64 ttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 103
|||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 41 ttcaggaagagatcgatgaaccgctgcatccagtgacttc 2
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcga 29
|||||||||||||||||||||
Sbjct: 93 ctggatgcagaggtttatcga 73
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 64 ttcaggaaaagatcgatgaaccgctgcctccagtgtcttc 103
|||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 42 ttcaggaagagatcgatgaaccgctgcatccagtgacttc 3
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||||||||||||||
Sbjct: 93 ctggatgcagaggtttatcgatcg 70
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 64 ttcaggaaaagatcgatgaaccgctgcctccagtg 98
|||||||| |||||||||||||||||| |||||||
Sbjct: 53 ttcaggaacagatcgatgaaccgctgcatccagtg 19
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcga 29
|||||||||||||||||||||
Sbjct: 107 ctggatgcagaggtttatcga 87
>40024_ath-MIR162a:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 caggaaaagatcgatgaaccgctgcctccag 96
|||||| ||||||||||||||||||||||||
Sbjct: 55 caggaagagatcgatgaaccgctgcctccag 25
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatc 31
|||||||||||||||||||||||
Sbjct: 109 ctggatgcagaggtttatcgatc 87
>39812_aly-MIR162a:mirbase
Length = 228
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 caggaaaagatcgatgaaccgctgcctccag 96
|||||| ||||||||||||||||||||||||
Sbjct: 98 caggaagagatcgatgaaccgctgcctccag 68
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatc 31
|||||||||||||||||||||||
Sbjct: 156 ctggatgcagaggtttatcgatc 134
>41220_csi-MIR162:mirbase
Length = 201
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 74 gatcgatgaaccgctgcctccagtgtcttc 103
||||||||||||||||||||||||| ||||
Sbjct: 111 gatcgatgaaccgctgcctccagtgacttc 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||||||||||||||
Sbjct: 181 ctggatgcagaggtttatcgatcg 158
>41929_osa-MIR162a:mirbase
Length = 171
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 actggatgcagaggtttatcgatcg 32
|||||||||||||||||||||||||
Sbjct: 164 actggatgcagaggtttatcgatcg 140
>39813_aly-MIR162b:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 4 aagcactggatgcagaggtttatcgatcg 32
|||| ||||||||||||||||||||||||
Sbjct: 138 aagcgctggatgcagaggtttatcgatcg 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 74 gatcgatgaaccgctgcctccag 96
|||||||||||||||||||||||
Sbjct: 72 gatcgatgaaccgctgcctccag 50
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||||||||||||||
Sbjct: 127 ctggatgcagaggtttatcgatcg 104
>40025_ath-MIR162b:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||||||||||||||
Sbjct: 99 ctggatgcagaggtttatcgatcg 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 74 gatcgatgaaccgctgcctccag 96
|||||||||||||||||||||||
Sbjct: 34 gatcgatgaaccgctgcctccag 12
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ggatgcagaggtttatcgatcg 32
||||||||||||||||||||||
Sbjct: 129 ggatgcagaggtttatcgatcg 108
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcga 29
|||||||||||||||||||||
Sbjct: 130 ctggatgcagaggtttatcga 110
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcga 29
|||||||||||||||||||||
Sbjct: 99 ctggatgcagaggtttatcga 79
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 9 ctggatgcagaggtttatcgatcg 32
||||||||||||| ||||||||||
Sbjct: 124 ctggatgcagaggcttatcgatcg 101
