miRNEST 2.0, an integrative microRNA resource :: BLAST
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 4 agaggaggcatccaaagggatcgcattgatcccgagtgtccctggccataattttggatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggaggcatccaaagggatcgcattgatcccgagtgtccctggccataattttggatc 60
Query: 64 atgctatccctttggattcctcct 87
||||||||||||||||||||||||
Sbjct: 61 atgctatccctttggattcctcct 84
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 113 bits (57), Expect = 2e-26
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 4 agaggaggcatccaaagggatcgcattgatcccgagtgtccctggcc-ataattttggat 62
||||||||||||||||||||||||||||||||| |||||| | || ||||||||||||
Sbjct: 1 agaggaggcatccaaagggatcgcattgatcccaagtgtctgtcccccataattttggat 60
Query: 63 catgctatccctttggattcctcct 87
|||||||||||||||||||||||||
Sbjct: 61 catgctatccctttggattcctcct 85
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 79.8 bits (40), Expect = 3e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 53 aattttggatcatgctatccctttggattcctcctttggt 92
||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aattttggatcatgctatccctttggattcctcctttggt 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 actagaggaggcatccaaagggatcgcattgatcc 35
|||||||||||||||||||||||||||||||||||
Sbjct: 8 actagaggaggcatccaaagggatcgcattgatcc 42
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 75/87 (86%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 5 gaggaggcatccaaagggatcgcattgatcccgagtgtccctggccataattttggatca 64
|||||||||||||||||||||||||||||||| | || |||| |||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcccaaa-----ctctccatgtctttggatca 56
Query: 65 tgctatccctttggattcctcctttgg 91
|||||||||||||||||||||||||||
Sbjct: 57 tgctatccctttggattcctcctttgg 83
>40470_gma-MIR393:mirbase
Length = 120
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 gaggaggcatccaaagggatcgcattgatccc 36
||||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatccc 33
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 54 attttggatcatgctatccctttggattcctccttt 89
|||| ||||||||||||||||||||||| |||||||
Sbjct: 85 atttgggatcatgctatccctttggatttctccttt 120
>40706_mtr-MIR393:mirbase
Length = 135
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gaggaggcatccaaagggatcgcattgatcc 35
|||||||||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcc 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 ggatcatgctatccctttggattcctccttt 89
||||||||| ||||||||||||| |||||||
Sbjct: 96 ggatcatgccatccctttggatttctccttt 126
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 aggcatccaaagggatcgcattgatccc 36
||||||||||||||||||||||||||||
Sbjct: 1 aggcatccaaagggatcgcattgatccc 28
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 54 attttggatcatgctatccctttggattc 82
|||| ||||||||||||||||||||||||
Sbjct: 89 atttgggatcatgctatccctttggattc 117
>42566_sbi-MIR393:mirbase
Length = 139
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 gaggaggcatccaaagggatcgcattgatcc 35
||||| |||||||||||||||||||||||||
Sbjct: 11 gaggaagcatccaaagggatcgcattgatcc 41
>39866_aly-MIR393b:mirbase
Length = 169
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 actagaggaggcatccaaagggatcgcattgatcc 35
||||||| | |||||||||||||||||||||||||
Sbjct: 5 actagagaaagcatccaaagggatcgcattgatcc 39
>39865_aly-MIR393a:mirbase
Length = 147
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 actagaggaggcatccaaagggatcgcattgatcc 35
||||||||| | |||||||||||||||||||||||
Sbjct: 5 actagaggaaggatccaaagggatcgcattgatcc 39
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 55 ttttggatcatgctatccctttggattcctcctt 88
||||||||||||||||| |||||||||| |||||
Sbjct: 106 ttttggatcatgctatctctttggattcatcctt 139
>40075_ath-MIR393a:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 55 ttttggatcatgctatccctttggattcctcctt 88
||||||||||||||||| |||||||||| |||||
Sbjct: 99 ttttggatcatgctatctctttggattcatcctt 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 4 agaggaggcatccaaagggatcgcattgatcc 35
|||||| | |||||||||||||||||||||||
Sbjct: 1 agaggaaggatccaaagggatcgcattgatcc 32
>41997_osa-MIR393:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 gcatccaaagggatcgcattgatcc 35
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 gcatccaaagggatcgcattgatcc 35
|||||||||||||||||||||||||
Sbjct: 33 gcatccaaagggatcgcattgatcc 57
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatccc 36
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatccc 33
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atccaaagggatcgcattgatcc 35
|||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcc 42
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 64 atgctatccctttggattcctcctt 88
||||||||||| |||||||||||||
Sbjct: 86 atgctatccctctggattcctcctt 110
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 atccaaagggatcgcattgatcc 35
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatcc 35
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>41999_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 actagaggaggcatccaaagggatcgcattgatc 34
||||| ||||| |||||||||||||||||||||
Sbjct: 14 actagtggaggactccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 actagaggaggcatccaaagggatcgcattgatc 34
||||| ||||| |||||||||||||||||||||
Sbjct: 14 actagtggaggactccaaagggatcgcattgatc 47
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatcc 35
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
