miRNEST 2.0, an integrative microRNA resource :: BLAST
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 228 bits (115), Expect = 8e-61
Identities = 129/136 (94%)
Strand = Plus / Plus
Query: 1 ttgcctatggagcatcatcaagattcacaagctttattagggctagtgtgtggtgatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttgcctatggagcatcatcaagattcacaagctttattagggctagtgtgtggtgatgat 64
Query: 61 ggtggcttttggtggtcccnnnnnnncaatccaatagccctttgaattgggaatcttgat 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 65 ggtggcttttggtggtccctttttttcaatccaatagccctttgaattgggaatcttgat 124
Query: 121 gatgctgcagcggcaa 136
||||||||||||||||
Sbjct: 125 gatgctgcagcggcaa 140
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 165 bits (83), Expect = 1e-41
Identities = 121/136 (88%)
Strand = Plus / Plus
Query: 1 ttgcctatggagcatcatcaagattcacaagctttattagggctagtgtgtggtgatgat 60
||||| |||||||| ||||||||||||||| |||||||||||||| | |||||||||||
Sbjct: 5 ttgccgatggagcaccatcaagattcacaaactttattagggctaataagtggtgatgat 64
Query: 61 ggtggcttttggtggtcccnnnnnnncaatccaatagccctttgaattgggaatcttgat 120
||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||
Sbjct: 65 ggtggcttttggtggtcccttcgtttcaacccaatagccatttgaattgggaatcttgat 124
Query: 121 gatgctgcagcggcaa 136
||||||||||||||||
Sbjct: 125 gatgctgcagcggcaa 140
>40366_rco-MIR172:mirbase
Length = 144
Score = 67.9 bits (34), Expect = 2e-12
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 87 caatccaatag-ccctttgaattgggaatcttgatgatgctgcagcggca 135
||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 95 caatccaatagtccctttgatatgggaatcttgatgatgctgcagcggca 144
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 7 atggagcatcatcaagattcacaagctttat-tagggctagtg 48
|||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 4 atggagcatcatcaagattcacaaactttatctagggctagtg 46
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgcagcggcaa 136
|||||||||||||||||||||||||||||
Sbjct: 106 tgggaatcttgatgatgctgcagcggcaa 134
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgcagcggcaa 136
|||||||||||||||||||||||||||||
Sbjct: 113 tgggaatcttgatgatgctgcagcggcaa 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 atggagcatcatcaagattcacaa 30
||||||||||||||||||||||||
Sbjct: 18 atggagcatcatcaagattcacaa 41
>40462_gma-MIR172e:mirbase
Length = 153
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaagcttta 36
|||||||||||||||||||||||||||||
Sbjct: 22 tggagcatcatcaagattcacaagcttta 50
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgcagcggcaa 136
|||||||||||||||||||||||| ||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaa 140
>40461_gma-MIR172d:mirbase
Length = 150
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 96 agccctttgaattgggaatcttgatgatgctgcagcggcaa 136
|||||||||| |||||||||||||||||||||||| ||||
Sbjct: 97 agccctttgatatgggaatcttgatgatgctgcagcagcaa 137
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 7 atggagcatcatcaagattcacaagctt 34
||||||||||||||||||||||||||||
Sbjct: 21 atggagcatcatcaagattcacaagctt 48
>40460_gma-MIR172c:mirbase
Length = 153
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaagcttta 36
|||||||||||||||||||||||||||||
Sbjct: 22 tggagcatcatcaagattcacaagcttta 50
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgcagcggcaa 136
|||||||||||||||||||||||| ||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaa 140
>40066_ath-MIR172d:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||||||||||
Sbjct: 89 gaatcttgatgatgctgcagcggcaa 114
>39855_aly-MIR172d:mirbase
Length = 163
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||||||||||
Sbjct: 113 gaatcttgatgatgctgcagcggcaa 138
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgcagcggcaa 136
|||||||||||||||||||||| ||||||
Sbjct: 102 tgggaatcttgatgatgctgcatcggcaa 130
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 gcatcatcaagattcacaagcttta 36
|||||||||||||||||||||||||
Sbjct: 16 gcatcatcaagattcacaagcttta 40
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgcagcggcaa 136
|||||||||||||||||||||| ||||||
Sbjct: 151 tgggaatcttgatgatgctgcatcggcaa 179
>41235_csi-MIR172c:mirbase
Length = 163
Score = 50.1 bits (25), Expect = 4e-07
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaagctttattagggctagtgtgtggtgatgatggtggct 67
||||||| ||||||||||||||| | |||||||| ||||| |||| ||| |||||||||
Sbjct: 13 tggagcaccatcaagattcacaaac--tattagggttagtgagtggagataatggtggct 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 ggaatcttgatgatgctgcagc 131
||||||||||||||||||||||
Sbjct: 120 ggaatcttgatgatgctgcagc 141
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 99 cctttgaattgggaatcttgatgatgctgca 129
||||| || ||||||||||||||||||||||
Sbjct: 112 cctttcaaatgggaatcttgatgatgctgca 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 gcatcatcaagattcacaagcttta 36
||||||||||||||||||| |||||
Sbjct: 26 gcatcatcaagattcacaaacttta 50
>41050_ghr-MIR172:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaa 30
|||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaa 39
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaa 30
|||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||||| ||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaa 124
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaa 30
|||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||||| ||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaa 124
>42779_zma-MIR172e:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 133 tgggaatcttgatgatgctgca 154
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 148 tgggaatcttgatgatgctgca 169
>41991_osa-MIR172b:mirbase
Length = 238
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 206 tgggaatcttgatgatgctgca 227
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 202 tgggaatcttgatgatgctgca 223
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaa 3
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaa 3
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 133 gaatcttgatgatgctgcatcggcaa 158
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcaca 29
||||||||||||||||||||||
Sbjct: 12 tggagcatcatcaagattcaca 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 112 gaatcttgatgatgctgcatcggcaa 137
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 84 tgggaatcttgatgatgctgca 105
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 150 gaatcttgatgatgctgcatcggcaa 175
>40067_ath-MIR172e:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 93 tgggaatcttgatgatgctgca 114
>39856_aly-MIR172e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 tgggaatcttgatgatgctgca 129
||||||||||||||||||||||
Sbjct: 96 tgggaatcttgatgatgctgca 117
>39852_aly-MIR172a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggcaa 136
||||||||||||||||||| ||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggc 134
||||||||||||||||||| ||||
Sbjct: 116 gaatcttgatgatgctgcaacggc 139
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggc 134
||||||||||||||||||| ||||
Sbjct: 121 gaatcttgatgatgctgcatcggc 144
>40702_mtr-MIR172:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tggagcatcatcaagattcacaag 31
||||||||||||| ||||||||||
Sbjct: 6 tggagcatcatcaggattcacaag 29
>40063_ath-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 gaatcttgatgatgctgcagcggc 134
||||||||||||||||||| ||||
Sbjct: 79 gaatcttgatgatgctgcatcggc 102
