miRNEST 2.0, an integrative microRNA resource :: BLAST
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 69
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||||||||||||||||
Sbjct: 70 ctttgtgctctctagtcttctgtcatc 96
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgaaatgcatggagcttaattgcatctcactc 69
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||||||||||||||||
Sbjct: 70 ctttgtgctctctagtcttctgtcatc 96
>40429_gma-MIR156e:mirbase
Length = 124
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||
Sbjct: 20 gttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactc 79
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||||||||||||||||
Sbjct: 80 ctttgtgctctctagtcttctgtcatc 106
>40336_rco-MIR156g:mirbase
Length = 97
Score = 109 bits (55), Expect = 3e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 5 gttgacagaagatagagagcactgacgatgaaatgcatgatgggactctgcatctcactc 64
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||||||||||||||||
Sbjct: 65 ctttgtgctctctagtcttctgtcatc 91
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 93.7 bits (47), Expect = 2e-20
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
|||||||||||||||||||||| || ||||||||||||||| ||| |||||||| ||
Sbjct: 5 gttgacagaagatagagagcacagatgatgaaatgcatggaaggcaatggcatctcattc 64
Query: 61 ctttgtgctctctagtcttctgtcatc 87
||||||||||| || ||||||||||||
Sbjct: 65 ctttgtgctctttattcttctgtcatc 91
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 91.7 bits (46), Expect = 8e-20
Identities = 77/87 (88%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
|||||||||||||||||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgaaatgcaaggagcca----gcatctcactc 65
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||| ||||||||||||
Sbjct: 66 ctttgtgctctctattcttctgtcatc 92
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 91.7 bits (46), Expect = 8e-20
Identities = 77/87 (88%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
|||||||||||||||||||||| || ||||| ||||||||| |||||||||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgatgtgcatggag----tttgcatctcactc 65
Query: 61 ctttgtgctctctagtcttctgtcatc 87
||||||||||||||| |||||||||||
Sbjct: 66 ctttgtgctctctagacttctgtcatc 92
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 91.7 bits (46), Expect = 8e-20
Identities = 77/87 (88%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
|||||||||||||||||||||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 20 gttgacagaagatagagagcacagatgatgagatgcatggagc----ctgcatttcactc 75
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||| ||||||||||||
Sbjct: 76 ctttgtgctctctattcttctgtcatc 102
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 83.8 bits (42), Expect = 2e-17
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactcct 62
|||||||||||||||||||| || ||||| |||||||||| | ||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgcatggagagtc--tgcatctcactcct 58
Query: 63 ttgtgctctctagtcttctgtcatc 87
|||||||||||| |||||||||||
Sbjct: 59 ttgtgctctctatgcttctgtcatc 83
>40337_rco-MIR156h:mirbase
Length = 97
Score = 69.9 bits (35), Expect = 3e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactc 60
|||||||||||||||||||||| || ||||| |||| || || ||||||||||||
Sbjct: 5 gttgacagaagatagagagcacagatgatgatgtgcaatgactttttctgcatctcactc 64
Query: 61 ctttgtgctctctagtcttctgtcatc 87
|||||||||||||| |||||||||||
Sbjct: 65 ctttgtgctctctatgcttctgtcatc 91
>40011_ath-MIR157b:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 48 ttgcatctcactcctttgtgctctctagtcttctgtcatc 87
|||||||| ||||||||||||||||||| |||||||||||
Sbjct: 71 ttgcatcttactcctttgtgctctctagccttctgtcatc 110
>40010_ath-MIR157a:mirbase
Length = 98
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 48 ttgcatctcactcctttgtgctctctagtcttctgtcatc 87
|||||||| ||||||||||||||||||| |||||||||||
Sbjct: 56 ttgcatcttactcctttgtgctctctagccttctgtcatc 95
>39798_aly-MIR157a:mirbase
Length = 123
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 48 ttgcatctcactcctttgtgctctctagtcttctgtcatc 87
|||||||| ||||||||||||||||||| |||||||||||
Sbjct: 68 ttgcatcttactcctttgtgctctctagccttctgtcatc 107
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 76/88 (86%), Gaps = 5/88 (5%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca-tggagcttaattgcatctcact 59
|||||||||||||||||||||| || ||||| ||||| |||| || |||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgatatgcaatgga-ctc---tgcatcccact 65
Query: 60 cctttgtgctctctagtcttctgtcatc 87
||||||||||||||| |||||||||||
Sbjct: 66 cctttgtgctctctatgcttctgtcatc 93
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 3e-10
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 39 ggagcttaattgcatctcact-cctttgtgctctctagtcttctgtcatc 87
||||||||||||||| ||| | |||||||||||||||| |||||||||||
Sbjct: 68 ggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatc 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcat 38
||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 5 gttgacagaagatagagggcactaaggatgatatgcat 42
>39799_aly-MIR157b:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 48 ttgcatctcactcctttgtgctctctagtcttctgtcatc 87
|||||||| |||||||||||||||||| |||||||||||
Sbjct: 56 ttgcatcttactcctttgtgctctctaagcttctgtcatc 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 3 gttgacagaagatagagagcac 24
>41077_gra-MIR157b:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 49 tgcatctcactcctttgtgctctctagtcttctgtcatc 87
|||||| ||||||||||||||||||| |||||||||||
Sbjct: 50 tgcatcccactcctttgtgctctctatgcttctgtcatc 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 4 gttgacagaagatagagagcac 25
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 49 tgcatctcactcctttgtgctctctagtcttctgtcatc 87
||||| |||||||||||||||||||| |||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtcatc 169
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcat 38
|||||||||||||||||||||| || ||||| ||||||
Sbjct: 5 gttgacagaagatagagagcacagatgatgatatgcat 42
>40428_gma-MIR156d:mirbase
Length = 151
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 49 tgcatctcactcctttgtgctctctagtcttctgtcatc 87
||||||| |||||||||||||||||| |||||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtcatc 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgcat 38
|||||||||||||||||||||| || ||||| ||||||
Sbjct: 20 gttgacagaagatagagagcacagatgatgatatgcat 57
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 7e-08
Identities = 69/83 (83%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactcct 62
|||||||||||||||||||| || || ||| ||||||||| ||||||||| | ||
Sbjct: 1 tgacagaagatagagagcacagatgacgaattgcatggag----tttgcatctcgatact 56
Query: 63 ttgtgctctctagtcttctgtca 85
|||||||||||| |||||||||
Sbjct: 57 ttgtgctctctatgcttctgtca 79
>40310_bra-MIR157a:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||||| | ||||| |||||
Sbjct: 13 gttgacagaagatagagagcactaaggatgacatgca 49
>40304_bol-MIR157a:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||||| | ||||| |||||
Sbjct: 5 gttgacagaagatagagagcactaaggatgacatgca 41
>40260_bna-MIR156c:mirbase
Length = 155
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||||| | ||||| |||||
Sbjct: 17 gttgacagaagatagagagcactaaggatgacatgca 53
>40259_bna-MIR156b:mirbase
Length = 208
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||||| | ||||| |||||
Sbjct: 24 gttgacagaagatagagagcactaaggatgacatgca 60
>40012_ath-MIR157c:mirbase
Length = 217
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||||| | ||||| |||||
Sbjct: 23 gttgacagaagatagagagcactaaggatgacatgca 59
>39800_aly-MIR157c:mirbase
Length = 293
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||||| | ||||| |||||
Sbjct: 54 gttgacagaagatagagagcactaaggatgacatgca 90
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 atctcactcctttgtgctctctagtcttctgtcatc 87
||||||||||||||||||||||| |||||| ||||
Sbjct: 58 atctcactcctttgtgctctctatgcttctgccatc 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcac 31
>41525_sly-MIR156a:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 2 ttgacagaagatagagagcactgacgatgaaatgc 36
|||||||||||||||||||||| | ||||| ||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
>41076_gra-MIR157a:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 49 tgcatctcactcctttgtgctctctagtcttctgtcatc 87
|||||| |||||||||||||||| || |||||||||||
Sbjct: 60 tgcatcccactcctttgtgctctttatgcttctgtcatc 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 4 gttgacagaagatagagagcac 25
>39801_aly-MIR157d:mirbase
Length = 256
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcactgacgatgaaatgca 37
||||||||||||||||||||| | ||||| |||||
Sbjct: 38 tgacagaagatagagagcactaaggatgatatgca 72
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcac 31
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 20 gttgacagaagatagagagcac 41
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 5 gttgacagaagatagagagcac 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 23 gttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 ttgacagaagatagagagcac 22
|||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcac 87
>40427_gma-MIR156c:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 145 gttgacagaagatagagagcac 166
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 22 gttgacagaagatagagagcac 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 59 tcctttgtgctctctagtcttctgtcatc 87
|||||||||||||||| |||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtcatc 114
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 22 gttgacagaagatagagagcac 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 59 tcctttgtgctctctagtcttctgtcatc 87
|||||||||||||||| |||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtcatc 114
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgacagaagatagagagcac 22
||||||||||||||||||||||
Sbjct: 5 gttgacagaagatagagagcac 26
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ttgacagaagatagagagcac 22
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ttgacagaagatagagagcac 22
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>40013_ath-MIR157d:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcact 23
|||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcact 44
>39727_smo-MIR156b:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcactgacg 27
|||||||||||||||||||| ||||
Sbjct: 12 tgacagaagatagagagcacagacg 36
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 65 gtgctctctagtcttctgtcatc 87
|||||||||| ||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatc 102
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tgtgctctctagtcttctgtcatc 87
||||||||||| ||||||||||||
Sbjct: 84 tgtgctctctactcttctgtcatc 107
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tgtgctctctagtcttctgtcatc 87
||||||||||| ||||||||||||
Sbjct: 80 tgtgctctctactcttctgtcatc 103
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>39415_pta-MIR156a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
