miRNEST 2.0, an integrative microRNA resource :: BLAST
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 264 bits (133), Expect = 2e-71
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 3 tatttgccgatgcagcatcatcaagattcccatcagaaattaaggaacctttcgagtaaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tatttgccgatgcagcatcatcaagattcccatcagaaattaaggaacctttcgagtaaa 74
Query: 63 ggaggtgaccgtgtaccaccccaactcaagccttaaagtttgtgaatcttgatgctgccg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ggaggtgaccgtgtaccaccccaactcaagccttaaagtttgtgaatcttgatgctgccg 14
Query: 123 catcggccaatat 135
|||||||||||||
Sbjct: 13 catcggccaatat 1
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 79.8 bits (40), Expect = 5e-16
Identities = 69/78 (88%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 59 taaaggaggtgaccgtgtaccacccca---actcaagccttaaagtttgtgaatcttgat 115
|||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||
Sbjct: 80 taaaggaggtgaccgtatgccacccctctcactcaagccttaaagcttgtgaatcttgat 21
Query: 116 gctgccgcatcggccaat 133
| ||||||||| ||||||
Sbjct: 20 gatgccgcatccgccaat 3
Score = 75.8 bits (38), Expect = 7e-15
Identities = 86/101 (85%), Gaps = 7/101 (6%)
Strand = Plus / Minus
Query: 3 tatttgccgatgcagcatcatcaagattcccatcagaaattaaggaacctttcgagtaaa 62
||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||
Sbjct: 182 tatttgccgatgcagcatcatcaagattcccat----aaaaaaggaccctttggactaaa 127
Query: 63 ggaggtgaccgtgtaccacccc---aactcaagccttaaag 100
|||||||||||| | ||||||| |||||||||||||||
Sbjct: 126 ggaggtgaccgtatgccacccctctcactcaagccttaaag 86
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/66 (86%), Gaps = 4/66 (6%)
Strand = Plus / Minus
Query: 5 tttgccgatgcagcatcatcaagattcccatcagaaattaaggaacctttcgagtaaagg 64
||||| ||||||||||||||||||||||||| || |||| | ||||||||||||||
Sbjct: 150 tttgctgatgcagcatcatcaagattcccatttga----aaggtaactttcgagtaaagg 95
Query: 65 aggtga 70
||||||
Sbjct: 94 aggtga 89
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 96 taaagtttgtgaatcttgatgctgccgcatc 126
||||||||||||||||||||| |||||||||
Sbjct: 50 taaagtttgtgaatcttgatgatgccgcatc 20
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattcccatca 37
|||||||||||||||||||||||||| |||||
Sbjct: 125 ttgccgatgcagcatcatcaagattctcatca 94
>40067_ath-MIR172e:mirbase
Length = 125
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 3 tatttgccgatgcagcatcatcaagattccca 34
||||||| ||||||||||||||||||||||||
Sbjct: 124 tatttgctgatgcagcatcatcaagattccca 93
>39856_aly-MIR172e:mirbase
Length = 133
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 3 tatttgccgatgcagcatcatcaagattccca 34
||||||| ||||||||||||||||||||||||
Sbjct: 127 tatttgctgatgcagcatcatcaagattccca 96
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 6 ttgccgatgcagcatcatcaagattcccatc 36
|||||||||||||||||||||||||| ||||
Sbjct: 3 ttgccgatgcagcatcatcaagattctcatc 33
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 cgatgcagcatcatcaagattcccatc 36
|||||||||||||||||||||||||||
Sbjct: 108 cgatgcagcatcatcaagattcccatc 82
>41991_osa-MIR172b:mirbase
Length = 238
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 9 ccgatgcagcatcatcaagattccca 34
||||||||||||||||||||||||||
Sbjct: 231 ccgatgcagcatcatcaagattccca 206
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 9 ccgatgcagcatcatcaagattccca 34
||||||||||||||||||||||||||
Sbjct: 227 ccgatgcagcatcatcaagattccca 202
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ttgccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||||
Sbjct: 3 ttgccgatgcagcatcatcaagattc 28
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||||
Sbjct: 158 ttgccgatgcagcatcatcaagattc 133
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||||
Sbjct: 137 ttgccgatgcagcatcatcaagattc 112
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||||
Sbjct: 175 ttgccgatgcagcatcatcaagattc 150
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattcccat 35
|||||| |||||||||||||||||||||||
Sbjct: 141 ttgccgctgcagcatcatcaagattcccat 112
>39852_aly-MIR172a:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||||
Sbjct: 125 ttgccgatgcagcatcatcaagattc 100
>41993_osa-MIR172d:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 tttgccgatgcagcatcatcaagattcccatca 37
||||| ||||||||||||||||||||| |||||
Sbjct: 118 tttgctgatgcagcatcatcaagattctcatca 86
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattccca 34
|||||| ||||||||||||||||||||||
Sbjct: 134 ttgccgctgcagcatcatcaagattccca 106
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattccca 34
|||||| ||||||||||||||||||||||
Sbjct: 140 ttgccgctgcagcatcatcaagattccca 112
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 96 taaagtttgtgaatcttgatgctgccgcatcggc 129
||||||||||||||||||||| ||| |||||||
Sbjct: 40 taaagtttgtgaatcttgatggtgctccatcggc 7
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattccca 34
|||||| ||||||||||||||||||||||
Sbjct: 140 ttgccgctgcagcatcatcaagattccca 112
>40366_rco-MIR172:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tgccgatgcagcatcatcaagattcccat 35
||||| |||||||||||||||||||||||
Sbjct: 144 tgccgctgcagcatcatcaagattcccat 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 96 taaagtttgtgaatcttgatg 116
|||||||||||||||||||||
Sbjct: 33 taaagtttgtgaatcttgatg 13
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 gccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||
Sbjct: 144 gccgatgcagcatcatcaagattc 121
>40063_ath-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 gccgatgcagcatcatcaagattc 31
||||||||||||||||||||||||
Sbjct: 102 gccgatgcagcatcatcaagattc 79
>42779_zma-MIR172e:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattccca 34
|||||||||||||||||||||||
Sbjct: 155 atgcagcatcatcaagattccca 133
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattccca 34
|||||||||||||||||||||||
Sbjct: 170 atgcagcatcatcaagattccca 148
>40462_gma-MIR172e:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 tgcagcatcatcaagattcccat 35
|||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccat 111
>40461_gma-MIR172d:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 tgcagcatcatcaagattcccat 35
|||||||||||||||||||||||
Sbjct: 130 tgcagcatcatcaagattcccat 108
>40460_gma-MIR172c:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 tgcagcatcatcaagattcccat 35
|||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccat 111
>41725_ata-MIR172:mirbase
Length = 277
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattcccatc 36
||||||||||||||||||||| ||||
Sbjct: 230 gatgcagcatcatcaagattctcatc 205
>40066_ath-MIR172d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattc 31
|||||| |||||||||||||||||||
Sbjct: 114 ttgccgctgcagcatcatcaagattc 89
>39855_aly-MIR172d:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 ttgccgatgcagcatcatcaagattc 31
|||||| |||||||||||||||||||
Sbjct: 138 ttgccgctgcagcatcatcaagattc 113
>42778_zma-MIR172d:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattcccatc 36
|||||||||||||||||||| ||||
Sbjct: 74 atgcagcatcatcaagattctcatc 50
>42777_zma-MIR172c:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattcccatc 36
|||||||||||||||||||| ||||
Sbjct: 123 atgcagcatcatcaagattctcatc 99
>42776_zma-MIR172b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattcccatc 36
|||||||||||||||||||| ||||
Sbjct: 126 atgcagcatcatcaagattctcatc 102
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattcccatc 36
|||||||||||||||||||| ||||
Sbjct: 119 atgcagcatcatcaagattctcatc 95
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattcccatc 36
|||||||||||||||||||| ||||
Sbjct: 102 atgcagcatcatcaagattctcatc 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 tgcagcatcatcaagattcccatc 36
||||||||||||||||||| ||||
Sbjct: 2 tgcagcatcatcaagattcacatc 25
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 100 gatgcagcatcatcaagattc 80
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattc 28
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattcccatc 36
|||||||||||||||||||| ||||
Sbjct: 99 atgcagcatcatcaagattctcatc 75
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 120 gatgcagcatcatcaagattc 100
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 121 gatgcagcatcatcaagattc 101
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 119 gatgcagcatcatcaagattc 99
>40463_gma-MIR172f:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 130 gatgcagcatcatcaagattc 110
>40459_gma-MIR172b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 135 gatgcagcatcatcaagattc 115
>40458_gma-MIR172a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 3 tatttgccgatgcagcatcatcaagattc 31
||||||| |||| ||||||||||||||||
Sbjct: 12 tatttgcggatgtagcatcatcaagattc 40
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 141 gatgcagcatcatcaagattc 121
>40324_bra-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 103 gatgcagcatcatcaagattc 83
>40323_bra-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 108 gatgcagcatcatcaagattc 88
>40307_bol-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 103 gatgcagcatcatcaagattc 83
>40306_bol-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 108 gatgcagcatcatcaagattc 88
>40064_ath-MIR172b:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 92 gatgcagcatcatcaagattc 72
>39853_aly-MIR172b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 gatgcagcatcatcaagattc 31
|||||||||||||||||||||
Sbjct: 114 gatgcagcatcatcaagattc 94
>42775_zma-MIR172a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattc 31
||||||||||||||||||||
Sbjct: 83 atgcagcatcatcaagattc 64
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattc 31
||||||||||||||||||||
Sbjct: 88 atgcagcatcatcaagattc 69
>41543_sly-MIR172b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattc 31
||||||||||||||||||||
Sbjct: 135 atgcagcatcatcaagattc 116
>41542_sly-MIR172a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atgcagcatcatcaagattc 31
||||||||||||||||||||
Sbjct: 106 atgcagcatcatcaagattc 87
>41235_csi-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 13 tgcagcatcatcaagattcc 32
||||||||||||||||||||
Sbjct: 139 tgcagcatcatcaagattcc 120
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 gccgatgcagcatcatcaagattc 31
|||| |||||||||||||||||||
Sbjct: 139 gccgttgcagcatcatcaagattc 116
