miRNEST 2.0, an integrative microRNA resource :: BLAST
>33346_bta-mir-374b:mirbase
Length = 95
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 agaaatcctactcggatgggtataatacaacctgctaagtgtactaccacttatcacgtt 60
||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||
Sbjct: 3 agaaatcctactcggatggatataatacaacctgctaagtgtcctagcacttatcaggtt 62
Query: 61 gtattatcattgaccgagtgtatggct 87
|||||||||||| ||| || |||||||
Sbjct: 63 gtattatcattgtccgtgtctatggct 89
>32042_mmu-mir-374:mirbase
Length = 95
Score = 101 bits (51), Expect = 8e-23
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 1 agaaatcctactcggatgggtataatacaacctgctaagtgtactaccacttatcacgtt 60
||||||||||||||| ||| |||||||||||||||||||||| ||| |||||| || |||
Sbjct: 3 agaaatcctactcgggtggatataatacaacctgctaagtgttctagcacttagcaggtt 62
Query: 61 gtattatcattgaccgagtgtatggct 87
|||||||||||| ||||| |||||||
Sbjct: 63 gtattatcattgtccgaggttatggct 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 ataatacaacctgctaagtg 41
||||||||||||||||||||
Sbjct: 69 ataatacaacctgctaagtg 50
>34077_ssc-mir-374b:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 5e-21
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 12 tcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatcatt 71
|||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct: 1 tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 60
Query: 72 gaccgagtgtatggct 87
| ||| || |||||||
Sbjct: 61 gtccgtgtctatggct 76
>34078_ssc-mir-374b:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 5e-21
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 12 tcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatcatt 71
|||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct: 1 tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 60
Query: 72 gaccgagtgtatggct 87
| ||| || |||||||
Sbjct: 61 gtccgtgtctatggct 76
>27155_eca-mir-374b:mirbase
Length = 72
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 10 actcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatca 69
|||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
Query: 70 ttg 72
|||
Sbjct: 61 ttg 63
>32887_rno-mir-374:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 11 ctcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatcat 70
||||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||| ||
Sbjct: 1 ctcggatggatataatacaacctgctaagtgttctagcacttagcacgttgtattattat 60
Query: 71 tgaccgag 78
|| |||||
Sbjct: 61 tgtccgag 68
>27877_mml-mir-374b:mirbase
Length = 72
Score = 85.7 bits (43), Expect = 5e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 10 actcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatca 69
|||||||||| |||||||||||||||||||||| ||| |||||| || ||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
Query: 70 ttg 72
|||
Sbjct: 61 ttg 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 ataatacaacctgctaagtg 41
||||||||||||||||||||
Sbjct: 58 ataatacaacctgctaagtg 39
>28614_hsa-mir-374b:mirbase
Length = 72
Score = 85.7 bits (43), Expect = 5e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 10 actcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatca 69
|||||||||| |||||||||||||||||||||| ||| |||||| || ||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
Query: 70 ttg 72
|||
Sbjct: 61 ttg 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 ataatacaacctgctaagtg 41
||||||||||||||||||||
Sbjct: 58 ataatacaacctgctaagtg 39
>28615_hsa-mir-374c:mirbase
Length = 70
Score = 85.7 bits (43), Expect = 5e-18
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 10 actcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatca 69
|||||||||| |||||||||||||||||||||| ||| |||||| || ||||||||||||
Sbjct: 70 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 11
Query: 70 ttg 72
|||
Sbjct: 10 ttg 8
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ataatacaacctgctaagtg 41
||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtg 32
>30351_ptr-mir-374b:mirbase
Length = 71
Score = 85.7 bits (43), Expect = 5e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 10 actcggatgggtataatacaacctgctaagtgtactaccacttatcacgttgtattatca 69
|||||||||| |||||||||||||||||||||| ||| |||||| || ||||||||||||
Sbjct: 1 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60
Query: 70 ttg 72
|||
Sbjct: 61 ttg 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 ataatacaacctgctaagtg 41
||||||||||||||||||||
Sbjct: 58 ataatacaacctgctaagtg 39
>26821_cfa-mir-374b:mirbase
Length = 52
Score = 77.8 bits (39), Expect = 1e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtattatcatt 71
|||||||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct: 2 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 52
>32043_mmu-mir-374c:mirbase
Length = 49
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtattatc 68
|||||||||||||||||||||| ||| |||||| || |||||||||||
Sbjct: 48 tataatacaacctgctaagtgttctagcacttagcaggttgtattatc 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ataatacaacctgctaagtg 41
||||||||||||||||||||
Sbjct: 2 ataatacaacctgctaagtg 21
>26820_cfa-mir-374a:mirbase
Length = 52
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| || |||||| || ||||||||
Sbjct: 2 tataatacaacctgataagtgttgtagcacttaccaggttgtatt 46
>27154_eca-mir-374a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| | ||||||||| ||||||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcaggttgtatt 57
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 24 aatacaacctgctaagtgtactaccacttatcacgttgtattat 67
||||||||||| |||||| || ||||||||| ||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattat 14
>28613_hsa-mir-374a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| || ||||||||| |||||||
Sbjct: 13 tataatacaacctgataagtgttatagcacttatcagattgtatt 57
>30350_ptr-mir-374a:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| || ||||||||| |||||||
Sbjct: 13 tataatacaacctgataagtgttatagcacttatcagattgtatt 57
>30978_ppy-mir-374a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| || ||||||||| |||||||
Sbjct: 13 tataatacaacctgataagtgttgtagcacttatcagattgtatt 57
>33345_bta-mir-374a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| | ||||||||| ||||||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcaggttgtatt 57
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 24 aatacaacctgctaagtgtactaccacttatcacgttgtattat 67
||||||||||| |||||| || ||||||||| ||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattat 14
>34076_ssc-mir-374a:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 tataatacaacctgctaagtgtactaccacttatcacgttgtatt 65
|||||||||||||| ||||||| | ||||||||| ||||||||
Sbjct: 11 tataatacaacctgataagtgttacagcacttatcaggttgtatt 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 24 aatacaacctgctaagtgtactaccacttatcacgttgtattat 67
||||||||||| |||||| || ||||||||| ||||||||||
Sbjct: 55 aatacaacctgataagtgctgtaacacttatcaggttgtattat 12
